| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2929 |
|---|
| Symbol | |
|---|
| ID | 7092849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 3226451 |
|---|
| End bp | 3228496 |
|---|
| Gene Length | 2046 bp |
|---|
| Protein Length | 681 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643466242 |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| Protein accession | YP_002363207 |
|---|
| Protein GI | 217979060 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
|---|
| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGCGG CAATCCTATT CCTTCCGCTC ATCGGATTCC TGATCGCAGG TCCGTTCGGG
CGGCAGCTCG GCGCGCGGCC CTCGGAACTG GTCACGACCA GCCTGCTGTT CGTCGCGGCC
GTATTGTCCT GGATCGCTTT CGCCAATGTC GCGCTCGGCG AGGAGCCGGG CAGCGTCTCG
CTGCTTGGCG AATGGTTCTC GTCCGGCGCG CTGCGCGCGG AATGGACGGT GCGGGTCGAC
AGCCTGACTG CGGTGATGCT CGTCGTCGTC ACCACCGTGT CGGCGCTCGT GCATCTCTAT
TCGATCGGCT ATATGAGCGA CGATCCCTCG CGGCCGCGCT TCTTTTCCTA TCTCTCGCTG
TTCACCTTCG CCATGCTGGC GCTGGTCACC GCCGACAATC TTCTGCAGAT GTTTTTCGGC
TGGGAAGGCG TCGGCCTCGC CTCCTATCTC TTGATCGGCT TCTGGTATCA AAAGCCCTCG
GCCAACGCCG CTGCGATGAA GGCGTTCGTC GTCAACCGCG TCGGCGACTT CGGCTTCCTG
CTCGGCATCT TCATGGTGTT CGTGCTGACC CGCTCGATCA ACTTCGAGCA GATTTTCGCC
GCGGCGCCGG GCCTCGCCAA CACCACGATC CATGTCTTCG GCGCCGAGTG GGACGCCATG
ACGATTACCT GCCTGCTGCT GTTCATGGGC GCCATGGGCA AGTCGGCGCA GTTCCTGCTG
CACACCTGGC TGCCGGACGC CATGGAAGGC CCGACCCCCG TTTCCGCCCT GATCCATGCC
GCGACCATGG TCACCGCCGG CGTCTTCATG GTGGCGCGCC TCTCGCCCTT GTTCGAGCAG
GCGCCGCATG CGCTGTCCTT CGTCATCTTC ATCGGCGCAA CTACCGCCTT TTTCGCCGCG
ACGGTCGGCC TCGTGCAGAA CGACATCAAG CGGGTCATCG CCTATTCGAC CTGTTCGCAG
CTCGGCTATA TGTTCGTCGC GCTCGGCGTC GGCGGCTATT CGATCGGCAT TTTCCACCTC
TTCACTCACG CCTTCTTCAA GGCGCTGCTG TTCCTTGGGG CCGGCTCGGT GATCGTCGCG
ATGCACCACG AGCAGGACAT GCGCAACATG GGCGGGCTGT GGCGGAAAAT CCCGTTCACC
TTCGCCATGA TGACGATCGG CACGCTGGCG CTGACCGGCT TTCCCTATAC GTCCGGCTAT
TTCTCCAAGG ACGCCATCAT CGAGGCGGCC TATGCCTCGC ATCGTCCGAT GGCTTTCTAC
GGCTATGTCA TGACCGTGAT CGCCGCCGCG CTGACCTCCT TCTATTCTTG GCGGCTTGTG
TTCCTGACCT TCTTCGGCAA GGCGCAATGG GCGGATGAGA GCCATGGCGC CGCGGCCCAT
TCGGTGGGGG CCGCCGCGGT CGCCAGCCAC GCGCATGACG CGCCGGACGC CCGCGCCGCC
GCTGATGCGC ATGACGACCA TGCCCACCAT GGTCCACTCA ATCCGCATGA AGCGCCGATC
GTCATGCTGA TCCCGCTCGC GGTCCTCGCA GTCGGCGCAC TCTTCGCGGG CCTGATTTTC
CACAGCGACT TCATCGGCGA AGGCTTTAAT GAATTCTGGA AGGGCTCGCT GTTCCTCGGC
CCCGACAATC ACATCCTGCA CCAGATGGAG GAAATTCCTC ATCTCGCCGG TCTGATGCCG
ACCATCATGA TGGTCCTCGG GTTCCTCATC GCGCTCTACA TGTATATTCT GGCGCCGGCG
ACCCCTGCAC GGCTCGCCGA GGCGGCGCCA GCGCTCTACC GCTTCCTGCT CAACAAATGG
TATTTCGACG AACTCTACGA CAAGATCTTC GTCCGCCCGG CCTTCTGGCT CGGCAATCTG
TTCTGGCGCG GCGGCGATGG CGCGATCATC GATCGTCTCG GCCCCGACGG CGTCGCCGCG
CGGGTTGTCG ACGTCACCGG CCGCGTCGTG AGGCTGCAGA GCGGCTATAT CTACCATTAT
GCTTTCGCCA TGCTGATCGG GCTCGCCGCC ATCATCACCT GGTATATCGT CGGGGGCGTG
CGCTGA
|
|---|
| Protein sequence | MYAAILFLPL IGFLIAGPFG RQLGARPSEL VTTSLLFVAA VLSWIAFANV ALGEEPGSVS
LLGEWFSSGA LRAEWTVRVD SLTAVMLVVV TTVSALVHLY SIGYMSDDPS RPRFFSYLSL
FTFAMLALVT ADNLLQMFFG WEGVGLASYL LIGFWYQKPS ANAAAMKAFV VNRVGDFGFL
LGIFMVFVLT RSINFEQIFA AAPGLANTTI HVFGAEWDAM TITCLLLFMG AMGKSAQFLL
HTWLPDAMEG PTPVSALIHA ATMVTAGVFM VARLSPLFEQ APHALSFVIF IGATTAFFAA
TVGLVQNDIK RVIAYSTCSQ LGYMFVALGV GGYSIGIFHL FTHAFFKALL FLGAGSVIVA
MHHEQDMRNM GGLWRKIPFT FAMMTIGTLA LTGFPYTSGY FSKDAIIEAA YASHRPMAFY
GYVMTVIAAA LTSFYSWRLV FLTFFGKAQW ADESHGAAAH SVGAAAVASH AHDAPDARAA
ADAHDDHAHH GPLNPHEAPI VMLIPLAVLA VGALFAGLIF HSDFIGEGFN EFWKGSLFLG
PDNHILHQME EIPHLAGLMP TIMMVLGFLI ALYMYILAPA TPARLAEAAP ALYRFLLNKW
YFDELYDKIF VRPAFWLGNL FWRGGDGAII DRLGPDGVAA RVVDVTGRVV RLQSGYIYHY
AFAMLIGLAA IITWYIVGGV R
|
|---|
| |