Gene Msil_2920 details

Gene Information

• Locus tag: Msil_2920
• ID: 7092840
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylocella silvestris BL2
• Kingdom: Bacteria
• Replicon accession: NC_011666
• Strand: +
• Start bp: 3217659
• End bp: 3218273
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 643466233
• Product: NADH (or F420H2) dehydrogenase, subunit C
• Protein accession: YP_002363198
• Protein GI: 217979051
• COG category: [C] Energy production and conversion
• COG ID: [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit
• TIGRFAM ID: [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 50
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACGAGG ATCTGAAACA GTTCGTGGAG ACGCTCTCGG CCGCGCTGCG CGGCTGGGTC 
GAGGACGCAA GCCTCGCCTA TGGCGAGCTG ACCCTGACGG TGCGGGCGGA CTGCCTCGTC 
GAGACGGTCG CGTTCCTGCG CGACGACCCG TCCTGCCTGT TTGTCTGCTT CATCGATCTC 
ACCGCCGTCG ATTATCCGAC CCGCGAGAAG CGCTTCGACG TCGTGACGCA TCTGCTCTCG 
CCGAAGCACA ACCGCCGCAT CCGCGTCAAA GTCGAGGCCG ACGAGCAGAC GCCGGTCGCC 
TCGCTCAGCG GTCTTTTTCC GGCCGCCAAT TGGTTCGAGC GCGAAGCCTA TGATCTGTTT 
GGCGTCTATT TCTCCGGCCA TCCCGATTTG CGCCGCCTGC TGACCGATTA CGGCTTCGAC 
GGCCATCCGC TGCGCAAGGA TTTTCCGATG ACGGGCTATG TCGAGGTCCG CTACGACGAC 
GAGGAAAAAC GCGTGCTCTA TGAGCCGGTG GCGCTGATGC AGGAGTTCCG CAATTTCGAT 
TTCCTGTCGC CATGGGAAGG CGCGGTCGAC TATGTGCTGC CCGGCGACGA AAAAGCCAAA 
CACAACCCGA GTTGA 

 

Protein sequence

MDEDLKQFVE TLSAALRGWV EDASLAYGEL TLTVRADCLV ETVAFLRDDP SCLFVCFIDL 
TAVDYPTREK RFDVVTHLLS PKHNRRIRVK VEADEQTPVA SLSGLFPAAN WFEREAYDLF 
GVYFSGHPDL RRLLTDYGFD GHPLRKDFPM TGYVEVRYDD EEKRVLYEPV ALMQEFRNFD 
FLSPWEGAVD YVLPGDEKAK HNPS