Gene Msil_2913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2913 
Symbol 
ID7092831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3208296 
End bp3208943 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content58% 
IMG OID643466224 
ProductEndopeptidase Clp 
Protein accessionYP_002363191 
Protein GI217979044 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID[TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC ACGATCCGAT CGAAGTTTAT AATAGCTATT TGATTCCTCA GGTTATCGAG 
AATACCAGCC GCGGCGAGCG GGGCTTCGAC ATCTATTCGC GCCTGTTGCG CGAGCGGATC
ATTTTCCTCA CCGGCCCGGT CGAGGATCAT ATGGCCTCGG TCATTATCGC GCAGCTTCTG
TTCCTCGAGG CGGAAAACCC GAAAAAAGAA ATTTCGATGT ATATCAATTC GCCGGGCGGC
GTCGTCACGG CTGGTCTTGC GATCTATGAC ACGATGCAGT TCATCCGGCC GAAAGTCTCG
ACGCTCTGCG TCGGCCAGGC CGCCTCGATG GGTTCGCTGC TGCTTTGCGC GGGCGAAGCC
GGGCAGCGAT TCGCGCTCCC CAATGCGCGC ATCATGGTGC ATCAGCCCTC CGGCGGCTTC
CAGGGTCAGG CTTCGGACAT CCTGCGTCAC GCCGAAGACA TCATGAAAGT CAAAAGGCGT
CTTAATGACA TCTACGTGAA GCATACCGGG CGTGATTACG ACACGATCGA GAAGACGCTC
GACCGCGACC ATTTCATGTC CTCCGACGAC GCCAGGGAGT TTGGCATCGT CGACAGCGTC
ATTTCGCAGC GGCCGGACGA GAGCGCAAGC GAAAGAAAAT CGGCCTGA
 
Protein sequence
MRDHDPIEVY NSYLIPQVIE NTSRGERGFD IYSRLLRERI IFLTGPVEDH MASVIIAQLL 
FLEAENPKKE ISMYINSPGG VVTAGLAIYD TMQFIRPKVS TLCVGQAASM GSLLLCAGEA
GQRFALPNAR IMVHQPSGGF QGQASDILRH AEDIMKVKRR LNDIYVKHTG RDYDTIEKTL
DRDHFMSSDD AREFGIVDSV ISQRPDESAS ERKSA