| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2882 |
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| Symbol | |
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| ID | 7092798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3172532 |
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| End bp | 3174013 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643466192 |
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| Product | type VI secretion system OmpA/MotB family protein |
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| Protein accession | YP_002363161 |
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| Protein GI | 217979014 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family
[TIGR03350] type VI secretion system OmpA/MotB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.132662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA AGGACCAGGC GCCGCCTGAA CCAGAAGAGC GCGACGACCG GACGATTTTC
CGGCCGATGC CGCCGCGCGC GGGGCCGTCG CAAAACCCGG CCGCCGGCGC GTCGCCATCC
GCGCCGCAGG CGCCTGCCGA TATGACCGTC GTTTCCTTCG CAGACGAACG CACCGTGTTC
CGGCCGAACC CGGGCGGCCG CCGCGCGCCC GGCCAGCCGG CGCCGGCGCC AAACGCCGCG
CCGCCGCCGC GCAAGGCCTC GACGCAGGGG CGCGATCTCG TGGCGCCCAA CGCCAATCCG
ATCCTGCAGG CGGCCGGGCC GCTCCTGCTG CTGCTTGGCC GTCTGCGCAC CGCGCTGGTG
CGCACGCCGG GACATAATCT GACGGCGCAG ATCGCCGCCG CGATCGAAAA ATGCGACCGG
GACATGATCG GGGCCGGCGT CGCTCCGGAT GAGGCGAACA CGGCCAAATA TGTGCTTTGC
GCCACCGCCG ACGAGGTGCT CGCCAATCTG CCGGCCGACG AGCGCGGCGG CGCGGCGCAA
TCCGGGCTGA CGACGCGATT CTTCGGCGAG ACCAGCGCCG GGCGACGCCT TTATGACGAG
CTTGCTCGGG TCGAAGAGGA TCCGCGCGAC CATTATTTTC TGCTTGAGCT GTTTCACGCC
TGCCTGGCGC TCGCCTTCCC GAGCGGCCGT CAGGCCGGCG CGGGGCCGGC GACGGCCGCA
GGCGCCATCG ATACGGTCCG CGCCAACCTC CGCGATCTTC TGCAGCAGAA CGGGCCGGCA
GCGCCCGCCG CTTTGTCGCC CCGCTGGCAG GGTCAGCCGC TCGCCGGACA TGCGGTGCGG
CTGCGCGTTC CGTTCTGGGC CGCCGCCGGC CTCATTGGCC TCGTGCTGTT TGGCGCGTTC
ATTTGGTTTC GCGTCTCGCT CGGCGCAGAG GCCGAGACGG CGGCGCAGCG CGTCGGCGCG
TTGAACCCGC TGACGCCGGT CGCGATCGGC CGCAAGGTCG CCGTCGCGCC GCCGCCGGCC
CCGCCGCCGA CGCCGGCGCA AGCCTCGCAG CTCGACCATG TCCGCAATGT GCTCGCGCCG
AATATCCAGT CCGGCGCCTT GAGCGTCGAC GCCACCGCCA ACCAGATCGT CATCCGCATC
ATTGACCGGG CGCTGTTTCA GCCCGGCAAA TCGACGATGC TCGACGATGT GAAGCCCTTG
ATGATGTATA TCGCGATGGC GCTCGACGAT GATCGCGGAG CGGTCAAGGT CATTGGCCAT
TCCGACAATA CGCCGATCTC CAACGCGCGC TTCGCCTCCA ATTTCGAACT CTCGCTCGAA
CGCGCCAATG TCGTCGGCGC GCTCTTGAAG CAATCTTTGT CCCATCCCGA ACGGGTGGAG
ACCGAGGGCA AGGGCGCCGA CGCGCCGATC GCGCCGAACG ATACGCCGGA GGGACGGGCC
AAGAACCGAA GGGTCGAGAT TGTCGTCCCG CGCAGCGACT GA
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| Protein sequence | MSDKDQAPPE PEERDDRTIF RPMPPRAGPS QNPAAGASPS APQAPADMTV VSFADERTVF
RPNPGGRRAP GQPAPAPNAA PPPRKASTQG RDLVAPNANP ILQAAGPLLL LLGRLRTALV
RTPGHNLTAQ IAAAIEKCDR DMIGAGVAPD EANTAKYVLC ATADEVLANL PADERGGAAQ
SGLTTRFFGE TSAGRRLYDE LARVEEDPRD HYFLLELFHA CLALAFPSGR QAGAGPATAA
GAIDTVRANL RDLLQQNGPA APAALSPRWQ GQPLAGHAVR LRVPFWAAAG LIGLVLFGAF
IWFRVSLGAE AETAAQRVGA LNPLTPVAIG RKVAVAPPPA PPPTPAQASQ LDHVRNVLAP
NIQSGALSVD ATANQIVIRI IDRALFQPGK STMLDDVKPL MMYIAMALDD DRGAVKVIGH
SDNTPISNAR FASNFELSLE RANVVGALLK QSLSHPERVE TEGKGADAPI APNDTPEGRA
KNRRVEIVVP RSD
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