Gene Msil_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2872 
Symbol 
ID7092788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3159707 
End bp3160264 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content60% 
IMG OID643466182 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_002363151 
Protein GI217979004 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2335] Secreted and surface protein containing fasciclin-like repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0637604 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCA ACCGTTCGGC TCTGGCCGCT ACATGCCTCG CCGCCGCCCT TGGCTTCTCC 
GCCACAGCTT CCGCCGAAAT GACCAAGATG GTTGGCGGCG CGGCGATGTA TCCAAGCAAG
AACATCATTC AAAACGCCGT CAATTCGAAG GACAACACCA CTCTTGTCGC CGCGGTCAAG
GCGGCCGGCC TTGTCGACAC GCTGGAGGGC CCCGGCCCCT TCACGGTTTT CGCGCCGACC
AACAAGGCGT TCAACAAGCT TCCGGCCGGC ACGGTCGAAA CCCTGCTGAA ACCCGAAAAC
AAGGGGCAGC TGACCGGCGT TCTGACCTAT CACGTGCTGC CGGGCCGCAT CACCGGACAG
GATCTTGCGA GCGCGATCAA GCAGGGCGGC GGCGAGGCGA CGTTCAAATC GGTGCAGGGC
GAACCGCTGG TCTTTTCGGA AAAGGGCAAA GCCTTCGAGA TCACCGATTC CAAGGGACGC
ATGGCGCGCA TTATTATCGC GGATGTCATG CAGTCGAATG GCGTGATCCA TGTGATCGAC
GAGGTGTTGC TGCCCTGA
 
Protein sequence
MKFNRSALAA TCLAAALGFS ATASAEMTKM VGGAAMYPSK NIIQNAVNSK DNTTLVAAVK 
AAGLVDTLEG PGPFTVFAPT NKAFNKLPAG TVETLLKPEN KGQLTGVLTY HVLPGRITGQ
DLASAIKQGG GEATFKSVQG EPLVFSEKGK AFEITDSKGR MARIIIADVM QSNGVIHVID
EVLLP