Gene Msil_2841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2841 
Symbol 
ID7093004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3118842 
End bp3119792 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content62% 
IMG OID643466152 
ProductExopolysaccharide synthesis ExoD 
Protein accessionYP_002363121 
Protein GI217978974 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.61734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAAAGC CGATTAACGC TGTCAACGCC GCCAGAAGCG CGCCAAAAAG CCCGGCGATT 
CGCACGTCCC AGGCCCTTCG TGAAATCCTG ACGAAAAATC CCACCGTGAA GAATTTCACA
GTGCAGCGAA TCGTCGAGTC GATCGGCGGC GCCGGGTCGC AGACCTCGCT GATGCTGTTC
TCGCTGCCCG CCATCGTGCC TTTTGCGGGC GCCTCGGATT TTACCGGCGT CCCGACCGGC
ATGATCGCCG GCCAAATGGC CGCCGGCAGA ACGCAGATCA AACTGCCCAA ATTCGTTCTC
GAGCGCTCGG TGCCGCGCAG GTCGCTCGCA GTGGCCATCC ACGCAATTTT GCCCGTTCTG
GAACGGGCGG AGAAGGCCGC GCGGCCGCGT TGGCGATGGG TGAGCGAGCC CGCGGCGCAA
CGGGTCCTCG CCGTGTTTAT TTTTCTGCTC GCCATCGCGG TCGCCATCCC GATGCTCGGC
TTCAACGCGC CGCACGCCGC GGCCATCTTC ATCATTTCCT TCGGGCTGGC TGAGCAGGAC
GGAGTGGCGA TTCTCGTCGG CGTCGCGGCG GGCGTCCTCT CTTTGTGCTT GATGATAGGA
CATAGTCTCT CGCGACGAAC CTTCCGCTCC TTCGCGACGG ATTGGTTGAA GAGCCTTTCG
AAAAAACTCG CGTTGCGGTG CGCCGCCGCT TTTTTCAAGA AGCTCGGCTT CAAATGGGCC
GAGTTGTTGA ATATAGAATG GGGCAAGCTC TTGCTGCTGT GGGATCCCGA GGCGCCGTCC
CGCAGCGCGA AGATCGAAAA ACCGGGTAAG GCCGCATTGA CCGACAAGCG GAAACGTCAA
ACCGCAGCAA GCAGACGCAA GCCCGCCCGG CTTCCGGCGT CCCGCTCCTT TTCGCAAGGG
GCGCTGCAGG CGCTGGAGAC AAGCCGCGCG CCCCGTTCGA TGGCGAGATG A
 
Protein sequence
MTKPINAVNA ARSAPKSPAI RTSQALREIL TKNPTVKNFT VQRIVESIGG AGSQTSLMLF 
SLPAIVPFAG ASDFTGVPTG MIAGQMAAGR TQIKLPKFVL ERSVPRRSLA VAIHAILPVL
ERAEKAARPR WRWVSEPAAQ RVLAVFIFLL AIAVAIPMLG FNAPHAAAIF IISFGLAEQD
GVAILVGVAA GVLSLCLMIG HSLSRRTFRS FATDWLKSLS KKLALRCAAA FFKKLGFKWA
ELLNIEWGKL LLLWDPEAPS RSAKIEKPGK AALTDKRKRQ TAASRRKPAR LPASRSFSQG
ALQALETSRA PRSMAR