Gene Msil_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2828 
Symbol 
ID7092991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp3106178 
End bp3107068 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID643466139 
Productfatty acid desaturase 
Protein accessionYP_002363108 
Protein GI217978961 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value0.926618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGAAAT CGATAATCGA ATGGCCCACG ATCGGTCTGG CCGCCTTCAT CTATGGCGGC 
TGGGCGGTCT TGACCTTTTT CCATGCGCAT CTGCCGATCG GACTCGTCGC GCTCCTCGGC
GCCTGGCTGA TCGCGTGGCA TTCCTCGTTG CAGCATGAGC TGCTGCACGG TCATCCGACC
GCGTGGCCCC GCGTCAACCA CGCCATCGGC CTTGTTCCGC TGTCGCTATG GCTGCCCTAT
GATGTTTACC GGAGGTCGCA TCTCGCGCAT CATCGCGCCG AAACATTGAC CGATCCGTCG
AATGATCCTG AATCCTATTA TTGGAGGGAG GAGGAGTGGG GGAGCCTCGG CCCTCTCGGA
CGTTGCCTTG TCCGCTGGCA AACGACCTTA GCGGGCCGAT TGACGCTCGG TCCGGCCTGG
AGCGCCGGTC GTTTATTTGC GCGGGAGCTG GCACATGCGC GAAAGAATCC GCGCGACGCC
CTGGCCGTCT GGGGCGCGCA TCTCTTCGGC TGCGCGGCGG CGCTCATCTG GATCGTCGGA
GTCTGCGAGA TGAGTCCATG GTTTTATCTG TTCGGCATTG TCTATCCGGG GACGTCCTTG
TCCCTCATTC GGTCGTTTGG AGAGCATCGC GCCGCAGGCG CCGTATCGGA GCGAACTGCG
ATTGTGGAAA ACGCCCGGAT TCTCGGGCCG CTTTTCCTCT TCAACAATCT TCACGTCGTT
CATCATGAGC GCCCGGATTT GCCATGGTAC CGGATTCCTG GCTGGTACCG GAAGCATCGG
GAGGAGCTGA TCGCAAAAAA TGGCGGCCGC GTTTACGACG GCTATAGTGA GATTGCGCGG
CGTTTTCTTT TCAAGCCGCA TGACGCGCCG GTCCATCCCT TCCTTTCATG A
 
Protein sequence
MQKSIIEWPT IGLAAFIYGG WAVLTFFHAH LPIGLVALLG AWLIAWHSSL QHELLHGHPT 
AWPRVNHAIG LVPLSLWLPY DVYRRSHLAH HRAETLTDPS NDPESYYWRE EEWGSLGPLG
RCLVRWQTTL AGRLTLGPAW SAGRLFAREL AHARKNPRDA LAVWGAHLFG CAAALIWIVG
VCEMSPWFYL FGIVYPGTSL SLIRSFGEHR AAGAVSERTA IVENARILGP LFLFNNLHVV
HHERPDLPWY RIPGWYRKHR EELIAKNGGR VYDGYSEIAR RFLFKPHDAP VHPFLS