| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2816 |
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| Symbol | |
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| ID | 7092979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 3092707 |
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| End bp | 3094440 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643466127 |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding |
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| Protein accession | YP_002363096 |
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| Protein GI | 217978949 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCA ACACCGTGGC TGACCTGCTG GTCGAAACCC TCAATCAGAT CGGCGTCGGC
CGCATCTATG GCGTCGTTGG CGACAGCCTC AACGCCGTGA CGGAAGCAAT CCGCGTTCGC
GGCGCGCCGG AGTGGATTCA CATGCGCAAT GAGGAGGCCG GCGCTTTCGC GGCCGGCGCC
GAGGCGCATT TGACCGGAAA CCTCGCGGTT TGCGCCGGCA GTTGCGGCCC CGGCAATCTG
CATCTCATCA ATGGGCTGTT CGACTGCCAC CGCTCGCGCG TGCCGGTTCT CGCCATCGCC
GCGCATATTC CAAGCCCCGA GATCGGCTCG GGCTATTTTC AGGAGACGCA CCCGCAGAAT
TTGTTCAGCG AATGCAGCCA TTTCTGCGAG CTGGTCTCAG TGCCGGAGCA AATGCCGCGC
GTCCTCGAAA GCGCGATCCG CGCCGCCCTC GGACGCGGCG GCGTGTCGGT CATCGTGCTG
CCGGGCGACG TCGCCATGCA GCCGGCGGCC GCGACCGCGA TATCGCCAAA TTCCGGCCTG
CTTCCGCCGC CGCCCGAGGC GCGGCCGCCG GTTGCCGAGA TCGAGGCGCT GGCCGGGCTG
CTGCGCGACG CAAAGAAGGT TACGCTGCTT TGCGGCCGCG GGACAAAGGG CGCCCACGCC
GAGCTTCTGG AGCTCGCCGA AACGTTGAAA GCGCCGATCG TCCACGCGCT CGGCGGCAAG
GAATATGTCG AATACGACAA TCCCTACGAC GTCGGCATGA CCGGCCTGAT CGGCTTCAGC
TCGGGCTATC AGGCGATGAA GGATTGCGAT GTCCTGTTGA TGCTCGGCAC GGATTTTCCC
TATCGCCAGT TCTATCCGGA GCAGGCGAAG ATCGCGCAGA TCGACCTTCG GCCGGAAAAT
CTCGGCCGCC GCTGCCGGCT CGAACTCGGC CTTGTCGGCG ACGTGAAGAC CAGTCTTCGC
GCTCTGCTGC CGCGCCTTGC CGCAAAGGAG GATCGGGCGC ACCTCGACGC CTGTCTCGCG
CATTATAAAA AGGCGCGCGA GGGCCTTGAC GATCTGGCGA CCGGCGAGCC GGGCAAAAAG
CCGATTCATC CGCAGTTCGT CGCAAAGACG GTCAGCGAAG TCGCCAGTCA GGACGCTGTT
TTCACCTGTG ACGTGGGCAC GCCGACGGTC TGGGCGGCGC GCTACCTCAA GATGAACGGA
AAGCGCCGCC TGATCGGCTC CTTCGTGCAT GGATCAATGG CGAACGCCAT GCCCCAGGCG
ATCGGCGCGC AGGCGGCCTT CCCGAAGCGG CAGATCATCT CCTTCTCGGG CGACGGCGGC
TTCGCAATGC TGATGGGCGA TTTCCTCACG CTGCGTCAGC AGAAACTGCC CGTCAAGATC
GTCATTTTCA ACAATGGAAC GCTCGGCTTC GTCGAGCTGG AGATGCAGTC CGCCGGCTTC
CTGCACATGG GGGTCAGCCT CGACAATCCG GATTTCGCCG CCATGGCCAA AGCGATCGGC
GTCTATGGCG AGCGGGTCGA AGACCCCGCA GATCTCCGCG GCGCCCTGGA GCGGGCCTTC
GGCCATGACG GCCCGGCGCT GGTCGACGTC GTGACCGCGC GGCATGAACT GCCGATGCCG
CCAAAGGCGA CGGTCGAACA GATGAAGGGC TTCAGCCTTT ATATGCTGCG CGCGGTCATG
AACGGGCGCG GCGACGAGAT CATCGATCTC GCGCGCACCA ATCTTCTGCG TTGA
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| Protein sequence | MKINTVADLL VETLNQIGVG RIYGVVGDSL NAVTEAIRVR GAPEWIHMRN EEAGAFAAGA
EAHLTGNLAV CAGSCGPGNL HLINGLFDCH RSRVPVLAIA AHIPSPEIGS GYFQETHPQN
LFSECSHFCE LVSVPEQMPR VLESAIRAAL GRGGVSVIVL PGDVAMQPAA ATAISPNSGL
LPPPPEARPP VAEIEALAGL LRDAKKVTLL CGRGTKGAHA ELLELAETLK APIVHALGGK
EYVEYDNPYD VGMTGLIGFS SGYQAMKDCD VLLMLGTDFP YRQFYPEQAK IAQIDLRPEN
LGRRCRLELG LVGDVKTSLR ALLPRLAAKE DRAHLDACLA HYKKAREGLD DLATGEPGKK
PIHPQFVAKT VSEVASQDAV FTCDVGTPTV WAARYLKMNG KRRLIGSFVH GSMANAMPQA
IGAQAAFPKR QIISFSGDGG FAMLMGDFLT LRQQKLPVKI VIFNNGTLGF VELEMQSAGF
LHMGVSLDNP DFAAMAKAIG VYGERVEDPA DLRGALERAF GHDGPALVDV VTARHELPMP
PKATVEQMKG FSLYMLRAVM NGRGDEIIDL ARTNLLR
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