Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2701 |
Symbol | |
ID | 7091170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 2956538 |
End bp | 2957539 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643466015 |
Product | secretion protein HlyD family protein |
Protein accession | YP_002362985 |
Protein GI | 217978838 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTA GATCGTCTCT GCGGCCGGCC TTGCTTGTCG GCCTCGCCAT TCTGGCCGGC GGCGCCTTCA CTCTGGTCTA TCGCAGCCGG CCGGTCGCCA AATCCGCCGC GGAGCCGCTC GGGATCGTGC GCGAGACGGA GATCCGCATC GCCCCCGAGA TCAATGGGCG TCTTGCCGAA ATGCGCGTCG TCGCCGGCCA GCGCGTCGCC AAGGGCGACC TTCTGGCGAG CCTCAGCAAT CCCGAACTCG AAGCCTCCGT CGTGGAGGCC AAGGCGGCGG CGGCCAATGC GCGGGCGGAG CGGAACAATG TCTATTCGGG GGTGCGCAAG GAACAGGTGG ACATCGCAGC GGAGGGCGTT CGCATCGCCG AGGCGAATCT GACCCTCGCC CAGCAGCAAT TCGCGCGATT GCAGGCGCTT GCGAGCAAGG ACTATGCGAC GCAGCAGAAA TTCGACGAGG GCGCCGCCGA GGTCAAGAAG GCCCAGGCCG CTCTCGTCCT ACGCCGCGCG ATCTATGCCC GCGATACGGC CGGCCCCACG GCCGAAGAGC GCGCCTCGGC CGACGCGAAG GTGCGCCTCG CCGAGGCGAG CCTCGCCGAT CTCGAGGCCA AGCTCTCGAA GACGACGATC CGCGCGCCCG TCGACGGGAC CGTGCGGCTC CTCGTCGGAA CGCCGGGCGA AGTCATCGCG CCGGGCCAGC CGATCATGAC GCTGGAAGCC GGACGCGAGC GGTGGTTCAC CTTCACGATT CGGGAAGATG CGCTGGACGG CCTCGCCATC GGCGCGCCCT TGTGGCTGCG CGACGCCAAA GGCGAGCGTA TCGAAACGAA AGTCGCCGAA CTGCGGCCGC TCGGCGAATT CGCGGTCTGG CGCGCGGCGC GGGCGGTCGG CGACCATGAC CTCAACAGCT TCCTGCTTCG CGCCGAGCCT GTCTCGGCAA CGGACGGGTT TGAACCCGGA ATGACCGTCT GGCTCGATCG CGGCAAGGAC GCCGGGCGCT GA
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Protein sequence | MSGRSSLRPA LLVGLAILAG GAFTLVYRSR PVAKSAAEPL GIVRETEIRI APEINGRLAE MRVVAGQRVA KGDLLASLSN PELEASVVEA KAAAANARAE RNNVYSGVRK EQVDIAAEGV RIAEANLTLA QQQFARLQAL ASKDYATQQK FDEGAAEVKK AQAALVLRRA IYARDTAGPT AEERASADAK VRLAEASLAD LEAKLSKTTI RAPVDGTVRL LVGTPGEVIA PGQPIMTLEA GRERWFTFTI REDALDGLAI GAPLWLRDAK GERIETKVAE LRPLGEFAVW RAARAVGDHD LNSFLLRAEP VSATDGFEPG MTVWLDRGKD AGR
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