| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2700 |
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| Symbol | |
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| ID | 7091169 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2953646 |
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| End bp | 2956252 |
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| Gene Length | 2607 bp |
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| Protein Length | 868 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643466014 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_002362984 |
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| Protein GI | 217978837 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCAGT CACGCGCATC CGATCCGGCC GCGCTGGAAA TGGAGGCGCT CCGCGAACAG
GTTCGGATCC TCTACCGGAC GCCTGCGATC CTGGCGATCA ATGCGGTCGC GGCTTTGCTT
TGCGCTTTCA TATTGCAGCC GATTTTTCCG GCGTGGGTTC TCGCCGCATG GGTTGGGCTA
TTCTGCATCG TCATCTCAGC GCGAATCTTC GACCGCTGGC GCTACAAACA TGAGCTGCAG
TCAGTTGAAG CAGCCGGTGG CTGGGGCCGT CGGTTTGTTT TCGGCGCCGC TGCGACGGGT
TGCCTTTGGG CGCTAGCCGG ATCGGTTATC TTGTTGACGC CCGATCCGGC GTATCATGCT
TTCATAGCCC TTATGTTGGC CGGCGTGATG GCCGGCGCGG TCATCAGCAA TTCAGCCTAT
CTGCCTGCGC TTGTCGCCTT TGTCGCGCCG GCCGTTCTGC CCGTGATCCT TGCCTTCCTC
ATCCGATCTG ATCCGACATC AATCTCGGCA GCCCTTCTCC TGGCGGCATT CGCCGCGCTG
GTCGGGATTG CAGGCCTTAA CGTCAATCGG TGGATCGCCT CCCGCGTTCG GCGTAAAATC
GCAAGGGAGT CATGGACGGT CGACGTCGAA AAAGAAATCG CCGAGCGCAA GCTGGCCGAA
AGCGAATTGC GTCGGGCCAA CCAGAGCCTC AAGATTGTCG CCGCTGGCGC CACTGAACTC
CTGCGTTCCT TGGATTTCGA TCGATCGGTC CCAAAACTGC TTGAGCTTGC CGGCCGGTCC
ATGGGCGTGA GCCGCGTCCA ATTGTACGAG CGCGATAGCG CGACCGATGC GAGTCTTTTA
AGGCCGGCGC GCTACGGATG GAGCGCCCCG GGTATTCCGC CGATGCTCGA AGCGCAAATT
GCCTCGCGCC CCGCAGCAAT CAAAGTTTCA TCTCTTTCGC TTGCGTCTCT CTCCGAAGGA
GAGACTGAGG CGATTATTAC GCGGGAGGCC GATGAGCCCG CCAGGCGTCT TCTCGACTCC
CGCGGCGTTC TCTCATTTCT CGTGGCGCCA GTGTTCGTGG AAGGGAAATG CTGGGGAGCC
CTAGGGGTCG ACGATTGCAG CGCGGAACGC GCGTGGTCGG CGGTCGACAG CGACGCCCTT
CGCGCGCTTG CAGAACTTAT CGCCGCCGCG ATCACCCGCG CGCAAACTCT CGAGGCGACG
ACGGACGCCG CCGGGATGGC CAAAACGGAG ATGACTCGCT TAGCCTACAC GGATCTCCTC
ACCGGTCTAC CCAATCGCGC GGCGTTCCTG CAAGAGCTCT CGGAAGTGTT TGCGGCGGCG
AAACGCGGCG CCAATCCGTT CGCCTTCCTT TACCTCGATC TTGATCGCTT CAAGGATATC
AACGCGACGC TCGGCCATTC GATTGGCGAT GCGCTGCTGA AGGCGGTGGC GGCGCGGCTG
AGCGGCGGTT TGCGTGAGGG GGATCTGTTT GCTCGCATTG GGGGCGACAA GTTTGCTGTG
GTTCTCACCA ATCTTGCCGA TCCCGCCGAG GTTGCGAATT ACGCGACCTC GATTTGCGGT
TTGACGGCCG CGCCCTTCGA TATCGGCGCG GCCGAGATTC ATATCACGAC AAGCATCGGC
GTCTCGATCT ATCGATCCGT GATGACGAAG GCCGAAGATC TGATGAGAGA GGCGGACGTC
GCAGTTTACG AAGCGAAGGA TGTGGGGCGC AACCAGTGCC GCTTCTATTC CGAGGCGCTC
GATCTTGCCA TGCGCGACCG TGTGAGCGTG ATCGAGGACC TTCACGCGGC GATCGAGCGA
GGCGAACTCG AACTCTACTA CCAGCCGCAG GTCGAATTGC CGTCAGGCGT CATCACAGGG
GTTGAGGCGT TGCTGCGCTG GAATCATCCC ACACGCGGCC TGCTCGGGCC GGGCCTCTTC
ATCCCTCTTG CCGAGAAGAT GGGATTGATC ACCCCAATTG GCCGATGGGT GTTGACCGAG
GTGTGCCGGC AGCTCCGGAT CTGGCGCGCC GAAGGAATCA ATCCACCGAT CATGGCGGTC
AATCTCTCCG CAGCGCAGCT TGCCGTCGAA TTCGATTTCG AACAACATCT GGCGCAGGCC
CTCGCTGTGG GCGGCTTTGA TCCAACGACT ATCGAGCTCG AGCTCACCGA AACCGTGCTC
ATGCAAACAG TCCAGGCGCA AGTCAGCGCG ATTGATCGCT TGCGCGCGCT CGGCGTGCGA
ATCGCGATCG ACGACTTCGG CACCGGCTAT TCCTCGCTCG AATATTTGCG CGATTATCGC
GTCGACCGCA TCAAGATCGC GCGGGAATTC GTCAGTCGCC TGCCCTCTGA CCCGCGCAGC
GCGACCATCG TGCGGGCGAC GATTGGACTC GCGCGCGAAC TCGGTATCGA AGTCATCGCC
GAAGGCGTCG AGACCGCGGG CCAGGCCGAA TTTCTCATGG CCTCAAGATG CCGACGTATC
CAGGGCTACT ACTTTGGCCG TCCGGCGCCG GCTGCGCAGG CCGCGGAAAT GCTGCGTCGG
GGCGCGCTCG CGCCCGCGGC GGAGAGCGGC GAGCCGACCC CATCGACGGA CAAGGCCGAC
GAAGAGCGCC CCGCCCCACG GCAATGA
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| Protein sequence | MEQSRASDPA ALEMEALREQ VRILYRTPAI LAINAVAALL CAFILQPIFP AWVLAAWVGL
FCIVISARIF DRWRYKHELQ SVEAAGGWGR RFVFGAAATG CLWALAGSVI LLTPDPAYHA
FIALMLAGVM AGAVISNSAY LPALVAFVAP AVLPVILAFL IRSDPTSISA ALLLAAFAAL
VGIAGLNVNR WIASRVRRKI ARESWTVDVE KEIAERKLAE SELRRANQSL KIVAAGATEL
LRSLDFDRSV PKLLELAGRS MGVSRVQLYE RDSATDASLL RPARYGWSAP GIPPMLEAQI
ASRPAAIKVS SLSLASLSEG ETEAIITREA DEPARRLLDS RGVLSFLVAP VFVEGKCWGA
LGVDDCSAER AWSAVDSDAL RALAELIAAA ITRAQTLEAT TDAAGMAKTE MTRLAYTDLL
TGLPNRAAFL QELSEVFAAA KRGANPFAFL YLDLDRFKDI NATLGHSIGD ALLKAVAARL
SGGLREGDLF ARIGGDKFAV VLTNLADPAE VANYATSICG LTAAPFDIGA AEIHITTSIG
VSIYRSVMTK AEDLMREADV AVYEAKDVGR NQCRFYSEAL DLAMRDRVSV IEDLHAAIER
GELELYYQPQ VELPSGVITG VEALLRWNHP TRGLLGPGLF IPLAEKMGLI TPIGRWVLTE
VCRQLRIWRA EGINPPIMAV NLSAAQLAVE FDFEQHLAQA LAVGGFDPTT IELELTETVL
MQTVQAQVSA IDRLRALGVR IAIDDFGTGY SSLEYLRDYR VDRIKIAREF VSRLPSDPRS
ATIVRATIGL ARELGIEVIA EGVETAGQAE FLMASRCRRI QGYYFGRPAP AAQAAEMLRR
GALAPAAESG EPTPSTDKAD EERPAPRQ
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