| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2699 |
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| Symbol | |
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| ID | 7091168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2949883 |
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| End bp | 2953629 |
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| Gene Length | 3747 bp |
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| Protein Length | 1248 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643466013 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
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| Protein accession | YP_002362983 |
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| Protein GI | 217978836 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATGGC TTGATGCGTC CTATGGATTT GGCCGCCGCG TTCGGAGCGC CTTGACAACG
ACAAGACAAT ATGGCGCGCG ATGGGCGGCG CGTGTCCTGC CGGTTCTTAT CATCGGCGTG
ATCGGCGTCA TCTTGTCGGT CGGCGCTGGT TTCAGGGTGG CGTATTACTG GGAGGACAAG
AATGTTCAGA CCGGACTGGA GCTTTCCGGC GAAAACCGCC GTCTTGCGCT ACAGAACGGG
CTGACTGACC TTGAGCATAT TATCCTGGCG GTGGCGCGCC AGTTCGAGCT TTCGGACAAG
GCGGTGACCC ATCTTGAATT TGATCGCGTC ACCGACCCAG AGAACGGGAT CTTCGATACG
TCATTGGAGA TCGCCTGGGC GCCGCGCCTG CGCCGGGACG ACCGCATCAA CACCCTTGGT
CCTGACGCGA GGCCCGTTTC AGCCGCGGGG CAGGACGAAT ATTTTCCGAT CCTCTTTGCG
CGCAACCGGA GCGAGACGTC GCCGCACTTT GGTTTCGACA TCCAATCCGA CCCGGCTCAG
CGAGAAGCCA TGGAGCGCAT CCTCGACGGC GCGCCGCTCG CCGCGACCGC GCCGATGAAG
CAAGCCAATT CCGGCCGCCC CTCAGTCGTT TTTTTGCTCG CGCCCGAATT TGGCTTCGGC
CTGCCGCACG ATACGCCGCA AGATCGCCGC CGCAACCTTG TGGGTTTCGT TCGGGTGGCG
ATTGCTCCCG GCGCGCTGAT CGACGAGATT CTTCGCGGCC AAAAATCGCC TCAGGGCGTA
GATATTAGCT TCTTTCAGGC GGGGGCCGGT CTGACCGAGT TTCCGTTCTA TATACGCTCC
TCGCTGCTGC GTTCCGTGCC GGCTGTGGCG AGGCCGCGCG GCGAACTCGA AGCGGGATTG
CATTGGATTG GCGACCTCAC GCTTGCGGAT GCGCGATGGA CGATGGTTGT CACTCCGATC
CCCGGCGCGA CCTTTCTGGC TGGTCACGAG CCCGCCGTAT TGGTGGCCGC GATGGGACTG
CTTCTGACCG CGGCGATCAT GACCTATGTG GAGATTACCC GACGAAACAA CTTGAGTCTC
CGGGGATTGG TGACGAATCT GCGCGAAAGC GAAGCGAGGT TTCGTCGTGT AACCGACAAC
GCCCATGATG CCATTATCAA GGCTGACGTT GAAGGCAATG TGAATTTCTG GAACCCGGCC
GCGGAGCGCA TCTTCGGCTA TAAGGAAAAA GAGATCCTGG GGCGCAGCGT ACATCAGCTG
TTGACCCCCG AACGGTACCG GACGAAAGCG CACGCGGAGT TGACGCGCTT CAGCCAGACC
GGAGAAGGCG CAGTCGTGGG GAGAACCGTC GAACTGTACG GCCTCCGCAA GGATGGTTCG
GAATTTCCCA TCGATCTCTC GGTCTCCGCG GTCCCTCGGG GCGACGCCTG GAGCTCCATC
GCGATCGTGC GCGACGTCAC CGAACGGGTG CGTACTGCCG ATACGCTGAA ACAGCGCAGC
GAGCTCCTGC GCGCGGTTTC AATCGTAGCC GCCGAATTGC TGACCGCCGC GACGGTCAAG
GACGCGATCC CCAAGGTGCT CAAGACGATT GGGGAAGCGG CGCGCGTCGA CCGCGTCCTC
ATCGTCGAGA CCAAGCACGA GGAGGGCAAA GAGCCTGTTC CCGTGCTCCG CTATTATTGG
AGCTCCCCAA ACGCGCCAGA CCCGCTCGAT CAGAGCTCCT TTGCTCAAAT GGCGCCAGCC
GAGCTCGAAA TGGACCCCTG GCTTGCGCCG CTCGGCGAAG GACGAGCGGT CACCGGTCTG
GCGCGAGCCA TGAAAGACGG CGCCGCCAAG GCTCTCTTTA CGCGCTTTGG GATCGTGACG
ATGCTTGACG TGCCCATGAC CATCGAGGGA ACACCCTGGG GACGAATTGG CTTCGACGAT
TGCAAAACCG AGCGTGAATG GACGTCAATC GACGTCGACA TCTTGCAGAC GGTTGCGGAT
TTAATCGGCG GCTCGATGAT GCGCGAGCGC TACATTGCAC AAATCAAGAA CGCGAACGCG
ATCATAGAGA GAAGTCCGAC CGTGCTGTTT CGCCTGCGCG GCGAGCCCCC GCTGCCGATG
ATCTATGTCT CACAAAATGT GGACCAGTTC GGCTATGACC CAGCAGAGAT GATCGAGTCG
CCAGAGCTCT ACAAGACCCT CCAGCATCCA GACGACACGG CAAAGGTGCT GGAATCTCTC
GTGGCGGCAG CAACGGAGGG CGGCGGGCCC GCGTCGCTAG AATTCCGGCT TCGGAGGAGC
GACGGCGTTT ATCGCTGGGT TGAGGGTTAT TCTACGCCGG TCCGCGACTC TGCGGGGCGC
CTGCTCGAAA TCGAAGGCAC GATGACCGAC ATCACGGAGC GCAAAGAGGC GCAGGAAAAG
ATTGCTTTGC TCGCGAGGAC CGACTCCCTC ACCGGGCTGG CCAATCGGGC GACATTTCTC
GACCGTCTTC AGCAGTCCTT CGCCGCCGCC AAGCGCGGCG CCAGCCCGTT CGCCGTTCTT
TATCTCGATC TGGATCGCTT TAAGGACGTC AACGACACGC TCGGCCATGG CATGGGCGAT
TTACTGCTCA AGGCGGTCGC CGACCGCCTG ACGAGCGGTT GCCGAGAAGC CGATCTTCCC
GCGCGTTTGG GCGGCGATGA GTTCGCAATT CTTCAATCGG AGTTAACCGA CCCTTCGGGA
GCTACGGCGT TGGCTGCGAC GATCCGTGAC TTGTTGACGG CGCCCTATCG ATTCGGTGAA
AGCGAAATGC AAATCACCGT CAGCATCGGC ATTGCTTCCT ATACGTCCGA GTCGTCGGGG
CCGAAGGAGA TGCTGGAGCA AGCCGATCTC GCTCTCTATC GCGCCAAAGA GGAAGGCCGG
GATCAATTCC GCTTCCATTC CGAGGAACTC GACAAAGAGG CTCGCGAGCG AGTCGCCCTC
AGGGCCGATC TGGCGCGCGC GATCGACCGT AACGAGCTGG AGCTGTACTA CCAGCCCCAA
CTCGAGCTCG CCACCAGTCG AATCGTCGGC ATGGAAGCGC TGATCCGGTG GAATCATCCG
CGTCGGGGCG TCCTCAAGCC GGCTGATTTC ATGTCGATCG GAGAGAAGGC GGGCGTCTCT
ATCGCGCTCG GACATTGGGT GCTCGATCAT GCTTGCGAGC AAATGAATGC TTGGCGAAAA
GCCGGAATCG CACCGTCAAC CCTCGCCGTC AATCTCTCGT TGGGTCAGCT CAAGACGGGA
GACAAGTTCG TTGACGATGT GATGCAAACC CTGGCGAAAT GGGGCCTTGA GCCGAAGGAG
TTGGAGCTCG ATGTGACCGA AGCCATGCTG GCTCATGTCA CTTTAATGCA TAACAATGTG
CTCGACCGTC TTCAGCAGCT CGGCGTGCAG ATCGCGATCG ACGATTTTGG AACCCAATAT
TCATCGCTTT GCTATCTCAG GACTTATCAT GTCAGCCGGC TGAAAATACC GCGCTCGGTG
ATGGAGGCTG CGACGCATGA TTCAGGCAGT TTGGCGATGG TGCGGGCGAT CATCGGCATT
GCCCGCGAGC TCAACATCGA GGTTGTCGCC CAAGGGGTGG AGACGGAGAA GCAACGCGCG
CTGCTGACGT CCGCTCCCTC GCCGACGAAA GTGCAAGGGT TCTACTACAG CGAACCGGTT
CAGGCGGATC GCGCCGCCGA ATTGTTGCGG AACGAGCGGA TCGAACCGCG TTTGGGAGCG
CGGCTCGACG CCAAACCCGC CGCCTGA
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| Protein sequence | MRWLDASYGF GRRVRSALTT TRQYGARWAA RVLPVLIIGV IGVILSVGAG FRVAYYWEDK
NVQTGLELSG ENRRLALQNG LTDLEHIILA VARQFELSDK AVTHLEFDRV TDPENGIFDT
SLEIAWAPRL RRDDRINTLG PDARPVSAAG QDEYFPILFA RNRSETSPHF GFDIQSDPAQ
REAMERILDG APLAATAPMK QANSGRPSVV FLLAPEFGFG LPHDTPQDRR RNLVGFVRVA
IAPGALIDEI LRGQKSPQGV DISFFQAGAG LTEFPFYIRS SLLRSVPAVA RPRGELEAGL
HWIGDLTLAD ARWTMVVTPI PGATFLAGHE PAVLVAAMGL LLTAAIMTYV EITRRNNLSL
RGLVTNLRES EARFRRVTDN AHDAIIKADV EGNVNFWNPA AERIFGYKEK EILGRSVHQL
LTPERYRTKA HAELTRFSQT GEGAVVGRTV ELYGLRKDGS EFPIDLSVSA VPRGDAWSSI
AIVRDVTERV RTADTLKQRS ELLRAVSIVA AELLTAATVK DAIPKVLKTI GEAARVDRVL
IVETKHEEGK EPVPVLRYYW SSPNAPDPLD QSSFAQMAPA ELEMDPWLAP LGEGRAVTGL
ARAMKDGAAK ALFTRFGIVT MLDVPMTIEG TPWGRIGFDD CKTEREWTSI DVDILQTVAD
LIGGSMMRER YIAQIKNANA IIERSPTVLF RLRGEPPLPM IYVSQNVDQF GYDPAEMIES
PELYKTLQHP DDTAKVLESL VAAATEGGGP ASLEFRLRRS DGVYRWVEGY STPVRDSAGR
LLEIEGTMTD ITERKEAQEK IALLARTDSL TGLANRATFL DRLQQSFAAA KRGASPFAVL
YLDLDRFKDV NDTLGHGMGD LLLKAVADRL TSGCREADLP ARLGGDEFAI LQSELTDPSG
ATALAATIRD LLTAPYRFGE SEMQITVSIG IASYTSESSG PKEMLEQADL ALYRAKEEGR
DQFRFHSEEL DKEARERVAL RADLARAIDR NELELYYQPQ LELATSRIVG MEALIRWNHP
RRGVLKPADF MSIGEKAGVS IALGHWVLDH ACEQMNAWRK AGIAPSTLAV NLSLGQLKTG
DKFVDDVMQT LAKWGLEPKE LELDVTEAML AHVTLMHNNV LDRLQQLGVQ IAIDDFGTQY
SSLCYLRTYH VSRLKIPRSV MEAATHDSGS LAMVRAIIGI ARELNIEVVA QGVETEKQRA
LLTSAPSPTK VQGFYYSEPV QADRAAELLR NERIEPRLGA RLDAKPAA
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