Gene Msil_2699 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2699 
Symbol 
ID7091168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2949883 
End bp2953629 
Gene Length3747 bp 
Protein Length1248 aa 
Translation table11 
GC content61% 
IMG OID643466013 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 
Protein accessionYP_002362983 
Protein GI217978836 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATGGC TTGATGCGTC CTATGGATTT GGCCGCCGCG TTCGGAGCGC CTTGACAACG 
ACAAGACAAT ATGGCGCGCG ATGGGCGGCG CGTGTCCTGC CGGTTCTTAT CATCGGCGTG
ATCGGCGTCA TCTTGTCGGT CGGCGCTGGT TTCAGGGTGG CGTATTACTG GGAGGACAAG
AATGTTCAGA CCGGACTGGA GCTTTCCGGC GAAAACCGCC GTCTTGCGCT ACAGAACGGG
CTGACTGACC TTGAGCATAT TATCCTGGCG GTGGCGCGCC AGTTCGAGCT TTCGGACAAG
GCGGTGACCC ATCTTGAATT TGATCGCGTC ACCGACCCAG AGAACGGGAT CTTCGATACG
TCATTGGAGA TCGCCTGGGC GCCGCGCCTG CGCCGGGACG ACCGCATCAA CACCCTTGGT
CCTGACGCGA GGCCCGTTTC AGCCGCGGGG CAGGACGAAT ATTTTCCGAT CCTCTTTGCG
CGCAACCGGA GCGAGACGTC GCCGCACTTT GGTTTCGACA TCCAATCCGA CCCGGCTCAG
CGAGAAGCCA TGGAGCGCAT CCTCGACGGC GCGCCGCTCG CCGCGACCGC GCCGATGAAG
CAAGCCAATT CCGGCCGCCC CTCAGTCGTT TTTTTGCTCG CGCCCGAATT TGGCTTCGGC
CTGCCGCACG ATACGCCGCA AGATCGCCGC CGCAACCTTG TGGGTTTCGT TCGGGTGGCG
ATTGCTCCCG GCGCGCTGAT CGACGAGATT CTTCGCGGCC AAAAATCGCC TCAGGGCGTA
GATATTAGCT TCTTTCAGGC GGGGGCCGGT CTGACCGAGT TTCCGTTCTA TATACGCTCC
TCGCTGCTGC GTTCCGTGCC GGCTGTGGCG AGGCCGCGCG GCGAACTCGA AGCGGGATTG
CATTGGATTG GCGACCTCAC GCTTGCGGAT GCGCGATGGA CGATGGTTGT CACTCCGATC
CCCGGCGCGA CCTTTCTGGC TGGTCACGAG CCCGCCGTAT TGGTGGCCGC GATGGGACTG
CTTCTGACCG CGGCGATCAT GACCTATGTG GAGATTACCC GACGAAACAA CTTGAGTCTC
CGGGGATTGG TGACGAATCT GCGCGAAAGC GAAGCGAGGT TTCGTCGTGT AACCGACAAC
GCCCATGATG CCATTATCAA GGCTGACGTT GAAGGCAATG TGAATTTCTG GAACCCGGCC
GCGGAGCGCA TCTTCGGCTA TAAGGAAAAA GAGATCCTGG GGCGCAGCGT ACATCAGCTG
TTGACCCCCG AACGGTACCG GACGAAAGCG CACGCGGAGT TGACGCGCTT CAGCCAGACC
GGAGAAGGCG CAGTCGTGGG GAGAACCGTC GAACTGTACG GCCTCCGCAA GGATGGTTCG
GAATTTCCCA TCGATCTCTC GGTCTCCGCG GTCCCTCGGG GCGACGCCTG GAGCTCCATC
GCGATCGTGC GCGACGTCAC CGAACGGGTG CGTACTGCCG ATACGCTGAA ACAGCGCAGC
GAGCTCCTGC GCGCGGTTTC AATCGTAGCC GCCGAATTGC TGACCGCCGC GACGGTCAAG
GACGCGATCC CCAAGGTGCT CAAGACGATT GGGGAAGCGG CGCGCGTCGA CCGCGTCCTC
ATCGTCGAGA CCAAGCACGA GGAGGGCAAA GAGCCTGTTC CCGTGCTCCG CTATTATTGG
AGCTCCCCAA ACGCGCCAGA CCCGCTCGAT CAGAGCTCCT TTGCTCAAAT GGCGCCAGCC
GAGCTCGAAA TGGACCCCTG GCTTGCGCCG CTCGGCGAAG GACGAGCGGT CACCGGTCTG
GCGCGAGCCA TGAAAGACGG CGCCGCCAAG GCTCTCTTTA CGCGCTTTGG GATCGTGACG
ATGCTTGACG TGCCCATGAC CATCGAGGGA ACACCCTGGG GACGAATTGG CTTCGACGAT
TGCAAAACCG AGCGTGAATG GACGTCAATC GACGTCGACA TCTTGCAGAC GGTTGCGGAT
TTAATCGGCG GCTCGATGAT GCGCGAGCGC TACATTGCAC AAATCAAGAA CGCGAACGCG
ATCATAGAGA GAAGTCCGAC CGTGCTGTTT CGCCTGCGCG GCGAGCCCCC GCTGCCGATG
ATCTATGTCT CACAAAATGT GGACCAGTTC GGCTATGACC CAGCAGAGAT GATCGAGTCG
CCAGAGCTCT ACAAGACCCT CCAGCATCCA GACGACACGG CAAAGGTGCT GGAATCTCTC
GTGGCGGCAG CAACGGAGGG CGGCGGGCCC GCGTCGCTAG AATTCCGGCT TCGGAGGAGC
GACGGCGTTT ATCGCTGGGT TGAGGGTTAT TCTACGCCGG TCCGCGACTC TGCGGGGCGC
CTGCTCGAAA TCGAAGGCAC GATGACCGAC ATCACGGAGC GCAAAGAGGC GCAGGAAAAG
ATTGCTTTGC TCGCGAGGAC CGACTCCCTC ACCGGGCTGG CCAATCGGGC GACATTTCTC
GACCGTCTTC AGCAGTCCTT CGCCGCCGCC AAGCGCGGCG CCAGCCCGTT CGCCGTTCTT
TATCTCGATC TGGATCGCTT TAAGGACGTC AACGACACGC TCGGCCATGG CATGGGCGAT
TTACTGCTCA AGGCGGTCGC CGACCGCCTG ACGAGCGGTT GCCGAGAAGC CGATCTTCCC
GCGCGTTTGG GCGGCGATGA GTTCGCAATT CTTCAATCGG AGTTAACCGA CCCTTCGGGA
GCTACGGCGT TGGCTGCGAC GATCCGTGAC TTGTTGACGG CGCCCTATCG ATTCGGTGAA
AGCGAAATGC AAATCACCGT CAGCATCGGC ATTGCTTCCT ATACGTCCGA GTCGTCGGGG
CCGAAGGAGA TGCTGGAGCA AGCCGATCTC GCTCTCTATC GCGCCAAAGA GGAAGGCCGG
GATCAATTCC GCTTCCATTC CGAGGAACTC GACAAAGAGG CTCGCGAGCG AGTCGCCCTC
AGGGCCGATC TGGCGCGCGC GATCGACCGT AACGAGCTGG AGCTGTACTA CCAGCCCCAA
CTCGAGCTCG CCACCAGTCG AATCGTCGGC ATGGAAGCGC TGATCCGGTG GAATCATCCG
CGTCGGGGCG TCCTCAAGCC GGCTGATTTC ATGTCGATCG GAGAGAAGGC GGGCGTCTCT
ATCGCGCTCG GACATTGGGT GCTCGATCAT GCTTGCGAGC AAATGAATGC TTGGCGAAAA
GCCGGAATCG CACCGTCAAC CCTCGCCGTC AATCTCTCGT TGGGTCAGCT CAAGACGGGA
GACAAGTTCG TTGACGATGT GATGCAAACC CTGGCGAAAT GGGGCCTTGA GCCGAAGGAG
TTGGAGCTCG ATGTGACCGA AGCCATGCTG GCTCATGTCA CTTTAATGCA TAACAATGTG
CTCGACCGTC TTCAGCAGCT CGGCGTGCAG ATCGCGATCG ACGATTTTGG AACCCAATAT
TCATCGCTTT GCTATCTCAG GACTTATCAT GTCAGCCGGC TGAAAATACC GCGCTCGGTG
ATGGAGGCTG CGACGCATGA TTCAGGCAGT TTGGCGATGG TGCGGGCGAT CATCGGCATT
GCCCGCGAGC TCAACATCGA GGTTGTCGCC CAAGGGGTGG AGACGGAGAA GCAACGCGCG
CTGCTGACGT CCGCTCCCTC GCCGACGAAA GTGCAAGGGT TCTACTACAG CGAACCGGTT
CAGGCGGATC GCGCCGCCGA ATTGTTGCGG AACGAGCGGA TCGAACCGCG TTTGGGAGCG
CGGCTCGACG CCAAACCCGC CGCCTGA
 
Protein sequence
MRWLDASYGF GRRVRSALTT TRQYGARWAA RVLPVLIIGV IGVILSVGAG FRVAYYWEDK 
NVQTGLELSG ENRRLALQNG LTDLEHIILA VARQFELSDK AVTHLEFDRV TDPENGIFDT
SLEIAWAPRL RRDDRINTLG PDARPVSAAG QDEYFPILFA RNRSETSPHF GFDIQSDPAQ
REAMERILDG APLAATAPMK QANSGRPSVV FLLAPEFGFG LPHDTPQDRR RNLVGFVRVA
IAPGALIDEI LRGQKSPQGV DISFFQAGAG LTEFPFYIRS SLLRSVPAVA RPRGELEAGL
HWIGDLTLAD ARWTMVVTPI PGATFLAGHE PAVLVAAMGL LLTAAIMTYV EITRRNNLSL
RGLVTNLRES EARFRRVTDN AHDAIIKADV EGNVNFWNPA AERIFGYKEK EILGRSVHQL
LTPERYRTKA HAELTRFSQT GEGAVVGRTV ELYGLRKDGS EFPIDLSVSA VPRGDAWSSI
AIVRDVTERV RTADTLKQRS ELLRAVSIVA AELLTAATVK DAIPKVLKTI GEAARVDRVL
IVETKHEEGK EPVPVLRYYW SSPNAPDPLD QSSFAQMAPA ELEMDPWLAP LGEGRAVTGL
ARAMKDGAAK ALFTRFGIVT MLDVPMTIEG TPWGRIGFDD CKTEREWTSI DVDILQTVAD
LIGGSMMRER YIAQIKNANA IIERSPTVLF RLRGEPPLPM IYVSQNVDQF GYDPAEMIES
PELYKTLQHP DDTAKVLESL VAAATEGGGP ASLEFRLRRS DGVYRWVEGY STPVRDSAGR
LLEIEGTMTD ITERKEAQEK IALLARTDSL TGLANRATFL DRLQQSFAAA KRGASPFAVL
YLDLDRFKDV NDTLGHGMGD LLLKAVADRL TSGCREADLP ARLGGDEFAI LQSELTDPSG
ATALAATIRD LLTAPYRFGE SEMQITVSIG IASYTSESSG PKEMLEQADL ALYRAKEEGR
DQFRFHSEEL DKEARERVAL RADLARAIDR NELELYYQPQ LELATSRIVG MEALIRWNHP
RRGVLKPADF MSIGEKAGVS IALGHWVLDH ACEQMNAWRK AGIAPSTLAV NLSLGQLKTG
DKFVDDVMQT LAKWGLEPKE LELDVTEAML AHVTLMHNNV LDRLQQLGVQ IAIDDFGTQY
SSLCYLRTYH VSRLKIPRSV MEAATHDSGS LAMVRAIIGI ARELNIEVVA QGVETEKQRA
LLTSAPSPTK VQGFYYSEPV QADRAAELLR NERIEPRLGA RLDAKPAA