Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2699 |
Symbol | |
ID | 7091168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 2949883 |
End bp | 2953629 |
Gene Length | 3747 bp |
Protein Length | 1248 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643466013 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) |
Protein accession | YP_002362983 |
Protein GI | 217978836 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGATGGC TTGATGCGTC CTATGGATTT GGCCGCCGCG TTCGGAGCGC CTTGACAACG ACAAGACAAT ATGGCGCGCG ATGGGCGGCG CGTGTCCTGC CGGTTCTTAT CATCGGCGTG ATCGGCGTCA TCTTGTCGGT CGGCGCTGGT TTCAGGGTGG CGTATTACTG GGAGGACAAG AATGTTCAGA CCGGACTGGA GCTTTCCGGC GAAAACCGCC GTCTTGCGCT ACAGAACGGG CTGACTGACC TTGAGCATAT TATCCTGGCG GTGGCGCGCC AGTTCGAGCT TTCGGACAAG GCGGTGACCC ATCTTGAATT TGATCGCGTC ACCGACCCAG AGAACGGGAT CTTCGATACG TCATTGGAGA TCGCCTGGGC GCCGCGCCTG CGCCGGGACG ACCGCATCAA CACCCTTGGT CCTGACGCGA GGCCCGTTTC AGCCGCGGGG CAGGACGAAT ATTTTCCGAT CCTCTTTGCG CGCAACCGGA GCGAGACGTC GCCGCACTTT GGTTTCGACA TCCAATCCGA CCCGGCTCAG CGAGAAGCCA TGGAGCGCAT CCTCGACGGC GCGCCGCTCG CCGCGACCGC GCCGATGAAG CAAGCCAATT CCGGCCGCCC CTCAGTCGTT TTTTTGCTCG CGCCCGAATT TGGCTTCGGC CTGCCGCACG ATACGCCGCA AGATCGCCGC CGCAACCTTG TGGGTTTCGT TCGGGTGGCG ATTGCTCCCG GCGCGCTGAT CGACGAGATT CTTCGCGGCC AAAAATCGCC TCAGGGCGTA GATATTAGCT TCTTTCAGGC GGGGGCCGGT CTGACCGAGT TTCCGTTCTA TATACGCTCC TCGCTGCTGC GTTCCGTGCC GGCTGTGGCG AGGCCGCGCG GCGAACTCGA AGCGGGATTG CATTGGATTG GCGACCTCAC GCTTGCGGAT GCGCGATGGA CGATGGTTGT CACTCCGATC CCCGGCGCGA CCTTTCTGGC TGGTCACGAG CCCGCCGTAT TGGTGGCCGC GATGGGACTG CTTCTGACCG CGGCGATCAT GACCTATGTG GAGATTACCC GACGAAACAA CTTGAGTCTC CGGGGATTGG TGACGAATCT GCGCGAAAGC GAAGCGAGGT TTCGTCGTGT AACCGACAAC GCCCATGATG CCATTATCAA GGCTGACGTT GAAGGCAATG TGAATTTCTG GAACCCGGCC GCGGAGCGCA TCTTCGGCTA TAAGGAAAAA GAGATCCTGG GGCGCAGCGT ACATCAGCTG TTGACCCCCG AACGGTACCG GACGAAAGCG CACGCGGAGT TGACGCGCTT CAGCCAGACC GGAGAAGGCG CAGTCGTGGG GAGAACCGTC GAACTGTACG GCCTCCGCAA GGATGGTTCG GAATTTCCCA TCGATCTCTC GGTCTCCGCG GTCCCTCGGG GCGACGCCTG GAGCTCCATC GCGATCGTGC GCGACGTCAC CGAACGGGTG CGTACTGCCG ATACGCTGAA ACAGCGCAGC GAGCTCCTGC GCGCGGTTTC AATCGTAGCC GCCGAATTGC TGACCGCCGC GACGGTCAAG GACGCGATCC CCAAGGTGCT CAAGACGATT GGGGAAGCGG CGCGCGTCGA CCGCGTCCTC ATCGTCGAGA CCAAGCACGA GGAGGGCAAA GAGCCTGTTC CCGTGCTCCG CTATTATTGG AGCTCCCCAA ACGCGCCAGA CCCGCTCGAT CAGAGCTCCT TTGCTCAAAT GGCGCCAGCC GAGCTCGAAA TGGACCCCTG GCTTGCGCCG CTCGGCGAAG GACGAGCGGT CACCGGTCTG GCGCGAGCCA TGAAAGACGG CGCCGCCAAG GCTCTCTTTA CGCGCTTTGG GATCGTGACG ATGCTTGACG TGCCCATGAC CATCGAGGGA ACACCCTGGG GACGAATTGG CTTCGACGAT TGCAAAACCG AGCGTGAATG GACGTCAATC GACGTCGACA TCTTGCAGAC GGTTGCGGAT TTAATCGGCG GCTCGATGAT GCGCGAGCGC TACATTGCAC AAATCAAGAA CGCGAACGCG ATCATAGAGA GAAGTCCGAC CGTGCTGTTT CGCCTGCGCG GCGAGCCCCC GCTGCCGATG ATCTATGTCT CACAAAATGT GGACCAGTTC GGCTATGACC CAGCAGAGAT GATCGAGTCG CCAGAGCTCT ACAAGACCCT CCAGCATCCA GACGACACGG CAAAGGTGCT GGAATCTCTC GTGGCGGCAG CAACGGAGGG CGGCGGGCCC GCGTCGCTAG AATTCCGGCT TCGGAGGAGC GACGGCGTTT ATCGCTGGGT TGAGGGTTAT TCTACGCCGG TCCGCGACTC TGCGGGGCGC CTGCTCGAAA TCGAAGGCAC GATGACCGAC ATCACGGAGC GCAAAGAGGC GCAGGAAAAG ATTGCTTTGC TCGCGAGGAC CGACTCCCTC ACCGGGCTGG CCAATCGGGC GACATTTCTC GACCGTCTTC AGCAGTCCTT CGCCGCCGCC AAGCGCGGCG CCAGCCCGTT CGCCGTTCTT TATCTCGATC TGGATCGCTT TAAGGACGTC AACGACACGC TCGGCCATGG CATGGGCGAT TTACTGCTCA AGGCGGTCGC CGACCGCCTG ACGAGCGGTT GCCGAGAAGC CGATCTTCCC GCGCGTTTGG GCGGCGATGA GTTCGCAATT CTTCAATCGG AGTTAACCGA CCCTTCGGGA GCTACGGCGT TGGCTGCGAC GATCCGTGAC TTGTTGACGG CGCCCTATCG ATTCGGTGAA AGCGAAATGC AAATCACCGT CAGCATCGGC ATTGCTTCCT ATACGTCCGA GTCGTCGGGG CCGAAGGAGA TGCTGGAGCA AGCCGATCTC GCTCTCTATC GCGCCAAAGA GGAAGGCCGG GATCAATTCC GCTTCCATTC CGAGGAACTC GACAAAGAGG CTCGCGAGCG AGTCGCCCTC AGGGCCGATC TGGCGCGCGC GATCGACCGT AACGAGCTGG AGCTGTACTA CCAGCCCCAA CTCGAGCTCG CCACCAGTCG AATCGTCGGC ATGGAAGCGC TGATCCGGTG GAATCATCCG CGTCGGGGCG TCCTCAAGCC GGCTGATTTC ATGTCGATCG GAGAGAAGGC GGGCGTCTCT ATCGCGCTCG GACATTGGGT GCTCGATCAT GCTTGCGAGC AAATGAATGC TTGGCGAAAA GCCGGAATCG CACCGTCAAC CCTCGCCGTC AATCTCTCGT TGGGTCAGCT CAAGACGGGA GACAAGTTCG TTGACGATGT GATGCAAACC CTGGCGAAAT GGGGCCTTGA GCCGAAGGAG TTGGAGCTCG ATGTGACCGA AGCCATGCTG GCTCATGTCA CTTTAATGCA TAACAATGTG CTCGACCGTC TTCAGCAGCT CGGCGTGCAG ATCGCGATCG ACGATTTTGG AACCCAATAT TCATCGCTTT GCTATCTCAG GACTTATCAT GTCAGCCGGC TGAAAATACC GCGCTCGGTG ATGGAGGCTG CGACGCATGA TTCAGGCAGT TTGGCGATGG TGCGGGCGAT CATCGGCATT GCCCGCGAGC TCAACATCGA GGTTGTCGCC CAAGGGGTGG AGACGGAGAA GCAACGCGCG CTGCTGACGT CCGCTCCCTC GCCGACGAAA GTGCAAGGGT TCTACTACAG CGAACCGGTT CAGGCGGATC GCGCCGCCGA ATTGTTGCGG AACGAGCGGA TCGAACCGCG TTTGGGAGCG CGGCTCGACG CCAAACCCGC CGCCTGA
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Protein sequence | MRWLDASYGF GRRVRSALTT TRQYGARWAA RVLPVLIIGV IGVILSVGAG FRVAYYWEDK NVQTGLELSG ENRRLALQNG LTDLEHIILA VARQFELSDK AVTHLEFDRV TDPENGIFDT SLEIAWAPRL RRDDRINTLG PDARPVSAAG QDEYFPILFA RNRSETSPHF GFDIQSDPAQ REAMERILDG APLAATAPMK QANSGRPSVV FLLAPEFGFG LPHDTPQDRR RNLVGFVRVA IAPGALIDEI LRGQKSPQGV DISFFQAGAG LTEFPFYIRS SLLRSVPAVA RPRGELEAGL HWIGDLTLAD ARWTMVVTPI PGATFLAGHE PAVLVAAMGL LLTAAIMTYV EITRRNNLSL RGLVTNLRES EARFRRVTDN AHDAIIKADV EGNVNFWNPA AERIFGYKEK EILGRSVHQL LTPERYRTKA HAELTRFSQT GEGAVVGRTV ELYGLRKDGS EFPIDLSVSA VPRGDAWSSI AIVRDVTERV RTADTLKQRS ELLRAVSIVA AELLTAATVK DAIPKVLKTI GEAARVDRVL IVETKHEEGK EPVPVLRYYW SSPNAPDPLD QSSFAQMAPA ELEMDPWLAP LGEGRAVTGL ARAMKDGAAK ALFTRFGIVT MLDVPMTIEG TPWGRIGFDD CKTEREWTSI DVDILQTVAD LIGGSMMRER YIAQIKNANA IIERSPTVLF RLRGEPPLPM IYVSQNVDQF GYDPAEMIES PELYKTLQHP DDTAKVLESL VAAATEGGGP ASLEFRLRRS DGVYRWVEGY STPVRDSAGR LLEIEGTMTD ITERKEAQEK IALLARTDSL TGLANRATFL DRLQQSFAAA KRGASPFAVL YLDLDRFKDV NDTLGHGMGD LLLKAVADRL TSGCREADLP ARLGGDEFAI LQSELTDPSG ATALAATIRD LLTAPYRFGE SEMQITVSIG IASYTSESSG PKEMLEQADL ALYRAKEEGR DQFRFHSEEL DKEARERVAL RADLARAIDR NELELYYQPQ LELATSRIVG MEALIRWNHP RRGVLKPADF MSIGEKAGVS IALGHWVLDH ACEQMNAWRK AGIAPSTLAV NLSLGQLKTG DKFVDDVMQT LAKWGLEPKE LELDVTEAML AHVTLMHNNV LDRLQQLGVQ IAIDDFGTQY SSLCYLRTYH VSRLKIPRSV MEAATHDSGS LAMVRAIIGI ARELNIEVVA QGVETEKQRA LLTSAPSPTK VQGFYYSEPV QADRAAELLR NERIEPRLGA RLDAKPAA
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