| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2694 |
|---|
| Symbol | |
|---|
| ID | 7091163 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2943449 |
|---|
| End bp | 2944411 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643466008 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_002362978 |
|---|
| Protein GI | 217978831 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAGT CCCTGATTTG GCGATTTGCT ACGGTTCAAG ACCTGATGGC TCCATTGGGC
ATGCTTGCGC TTGTTATCGG CGGCGCGGCG CTGATCGGTT CGGGCCGCCG AACGCGCGCC
GATCTGGTGG CGCAGCGTGT GGACAGGCTT CAATCATCCG CTATCGCAGC GCCGAGCAGC
GACGAACCGG AGGCGCATCT GACAGCGGCG CGGGCGCCGC CTCTCCTCGC ACTGAGCCTG
TCGCCGGCGG AGCGGCGACA GGTCGTATGG CTCTTTTCCA AACTTCAGGC GCCAGCCGAC
CAAGCCCTTC TGTATTTCAC GATCGCCCGG TTGGGTATTG CCGCAAGCTT CGGCGCGCTG
ACCCTGATAT TTGTCGGGCG CCTTTCGATC GTGGCCGGTT CATTTTTGAC GCCGCTCATG
GCCGGGCTCG CGGCTACGGC AGTTGGCTGG ATACTGCCCG CCATCTTCAT TGCTTTTGGC
GTGCGGCGTC GGACCAAAGC CGCGGCGGCG GGGCTTCCCG ACGCGCTCGA GTTGCTGGTT
GTGTGCGTGG AGGCCGGCCT CTCGCTCGAA GATGCGCTTC AGCGGGTCGC CCAAGAGCTC
AAGAACTCTC AGCCGGCGCT GGCCGACGAG CTTACGTTGA CGTGGGCTGA AATCAATATT
CTGCCAAGCC GCGAACAAGC GCTCGCCAAT CTCGCAGATC GCGTGAACGT CCCCACCGTC
AAATCCATGG TCAGCATGAT TTCACAGAGC ATGCGCTACG GCACGCCGCT CGCCCAGTCG
CTACGCGTCG GCGCGACGGA AATGCGCAAC GACCAAATGA CCCTGTTGGA AGAACGCGCT
AACCGCCTGC CAGCGCTCAT GACCATTCCT GTCATGCTTT TCATTATGCC GACGCTTTTT
TTGATCGTAG GCGGGCCAGC GGCCCTGCGA TTGATCGACA TGTTCCGAAG CGGAGCGCAT
TAG
|
|---|
| Protein sequence | MSESLIWRFA TVQDLMAPLG MLALVIGGAA LIGSGRRTRA DLVAQRVDRL QSSAIAAPSS
DEPEAHLTAA RAPPLLALSL SPAERRQVVW LFSKLQAPAD QALLYFTIAR LGIAASFGAL
TLIFVGRLSI VAGSFLTPLM AGLAATAVGW ILPAIFIAFG VRRRTKAAAA GLPDALELLV
VCVEAGLSLE DALQRVAQEL KNSQPALADE LTLTWAEINI LPSREQALAN LADRVNVPTV
KSMVSMISQS MRYGTPLAQS LRVGATEMRN DQMTLLEERA NRLPALMTIP VMLFIMPTLF
LIVGGPAALR LIDMFRSGAH
|
|---|
| |