Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2665 |
Symbol | |
ID | 7091134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2915269 |
End bp | 2916993 |
Gene Length | 1725 bp |
Protein Length | 574 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643465979 |
Product | Polypeptide-transport-associated domain protein ShlB-type |
Protein accession | YP_002362949 |
Protein GI | 217978802 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2831] Hemolysin activation/secretion protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCC GCACGTTCCT TGTCGGCTGT GGCGCGCTGG AAGCCATGCT GGCCGGCGCA TTCCCGGCCC GGGCGCAGAC CCCGGCGCCC ATCGTGCCCT TTAATATCGG CGACGCTGTG CGCGAGAGCG AACAGTCGCG GCGGCCTCCG CTGCCGGCCC CGGCCGCCGC GCCCGTGCTG CCGCAGCTTG TCGAGCCGCA ATTTACGATG AAGGACAAGG AGACGCTGTT TGTCCGCAGC ATCGAGATCG AGGGTCCAGA CCTCGGCGCC GGCGCTGAGG CGCGCGAGCT GATCGCGCCC TACGAGAACC GCACATTGCA GCTTGGCGAG ATCTACGGGC TCGCGGACCA GCTCACGACG CTCTACCGCA CGAAGGGCTA TCTCGTCGCC AAAGCCTATA TCCCGGCCCA GGACGCGCGC AGCGGCGCGC TGCGGATCAA GCTCGTTCCC GGCCTCTATG GAACTATCAC GATCAAGAAC GACTCGCTCG TCCGGGACGA TTATCTGCGC GGCGTGATCG ACCAGGCGCT CGCCGGCTCG CCGGTCATCC AGAAGGACCC GCTCGAGCGC GCGATGCTGT TGATTTCCGA TCTCCCGGGC GCCGGCATGC CGCGGGTCGC GATCGGGCCG GGGCAACAGC CGGAGACGTC GGATTTCGTG TTCAGCGCGC CGGAGGCGCG CCGCCTCGAC GGCTATCTGC TCGGCGATAA TTTCGGGTCG CCCTTCACCG GCCGGGACAG GCTGAGCGGC GGCCTCAATC TGAATTCTCC GCTCGGCTAT GGGGACCGCC TCTCGGCGTT CGGCATCGTC TCGGAGCGGG CCGGCCTCGT GAACGGGCGC GCGTCCTATT CCTTTCCAAT CTTCTACGAT GGGCTGCGCG CCGAAATCGG CGCCTTTCGC ACGACCTATG CGCTGAGCGG CGTCTATGAG GGTCTCGATG CGACGGGCAC GGCCGACGCG GTAACGGCGA CGCTGACCTA TGCGATGCGG CGCCAGCACG ACGACAGCAT CTATATCTCG GGCAACTACA GCCATATGTC GTTGAACGAC AAAGCGCTTG GCGTTTCCTT CGCGCAGAGG ACGATCGATC TCGGCACGGC GGCGATCACC CGCGACACGT TCAGCGACTT CATCGGCCTG CCGCTGACGA CGAGCACGAC CTTCTCCTTC ACCGCGGGCT ATGTGAACTT CCCGGACCCC AAGCAGGAAG TCGCCAATAT CGCGACGATC GACACCGCCG GCAATTACGC GAAAATCAAT CTCTCCTTTA TCGCGACCCT CGCGCTCGCC GAGAGGCTGT CGCTTTCGGC CAATGTCAGG GGGCAGAAGT CGCTGTCGGG CAACCTCGAT TCCAGTCAGC AAATGAGCCT CACCGGCTAT TGGGGCGTGC GCTCCTATGA TGAAGGGCTG AGCGGAGACA GCGGCTATCT CGTGACGCCC GAGCTGAAAT ACGCCCTGCC TGACATTTAC GGCTATCGCC ATGCGGTCGG CCTCTTCACC GACGTCGGCG CCGCGTGGCT GGAAAACGGC TCCTACACCC TGGCGCAGAA GAGCTACACG CAGCTGAATG ATTTCGGCCT CAGCTACAAT GCGACCTATG AATATTCGCC CGGGCGGTTC TTATTGGCGA AGGCGCTGGT CGCCCACACC TATGGCTCCG ACTTCGGCGC GAAGAGCTAC GACCGGACCA CCAAGGGGCT GGTGCAGGTC GGCTTCACGT TCTGA
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Protein sequence | MKLRTFLVGC GALEAMLAGA FPARAQTPAP IVPFNIGDAV RESEQSRRPP LPAPAAAPVL PQLVEPQFTM KDKETLFVRS IEIEGPDLGA GAEARELIAP YENRTLQLGE IYGLADQLTT LYRTKGYLVA KAYIPAQDAR SGALRIKLVP GLYGTITIKN DSLVRDDYLR GVIDQALAGS PVIQKDPLER AMLLISDLPG AGMPRVAIGP GQQPETSDFV FSAPEARRLD GYLLGDNFGS PFTGRDRLSG GLNLNSPLGY GDRLSAFGIV SERAGLVNGR ASYSFPIFYD GLRAEIGAFR TTYALSGVYE GLDATGTADA VTATLTYAMR RQHDDSIYIS GNYSHMSLND KALGVSFAQR TIDLGTAAIT RDTFSDFIGL PLTTSTTFSF TAGYVNFPDP KQEVANIATI DTAGNYAKIN LSFIATLALA ERLSLSANVR GQKSLSGNLD SSQQMSLTGY WGVRSYDEGL SGDSGYLVTP ELKYALPDIY GYRHAVGLFT DVGAAWLENG SYTLAQKSYT QLNDFGLSYN ATYEYSPGRF LLAKALVAHT YGSDFGAKSY DRTTKGLVQV GFTF
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