Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2606 |
Symbol | |
ID | 7093260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2844841 |
End bp | 2848359 |
Gene Length | 3519 bp |
Protein Length | 1172 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 643465921 |
Product | urea carboxylase |
Protein accession | YP_002362891 |
Protein GI | 217978744 |
COG category | [E] Amino acid transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG2049] Allophanate hydrolase subunit 1 [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain [TIGR02712] urea carboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0287573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCA AGGTTCTGAT CGCCAACAGA GGCGAGATCG TCGGCCGCGT CGTGCGCACC TTGCGCAAGA TGGGCGTCGG CTCCGTCGCT GTTTACTCTG ACGCCGATCG CTTCTCGCCA ACCGTGCTTG CGGCGGACGA ACAGGCAAGG CTCGGGCCCC CGCCCGCCGC GCAAAGCTAT CTCAATGTCG AGGCGGTCAT CGCCGCCTGC AAGGCGACAG GCGCCGAGGC GGTGCATCCG GGCTACGGGT TTTTGAGCGA GAACCCCGGC TTCGCCGAAA GGCTGGCCGC GGAAGGGATC AAATTCATAG GCCCTCAACC GCAACATATG CGCTCTTTCG GCCTCAAGCA TAGCGCGCGC GAGGTGGCGC AGCGCGCCAA CGCGCCGCTG CTGCCGGGGA GCGGCCTGCT CGACTCGGCC GAGGACGCGC TGAAGGAAGC CGAGCGCATC GGCTATCCGG TGATGTTGAA AAGCACCGCC GGCGGCGGCG GCATCGGCAT GCAGCTTTGT TTTGGCCCGG ATGAATTGGC TGCGCGATTT GAATCGGTGC GACGGCTCGG GGCGAATAAT TTCGGCGACA ATCGCGTCTA TCTCGAAAAA TTCGTTGCGC GCGCGCGGCA TGTCGAGGTG CAGATTTTCG GCGACGGCAA AGGCGGCGTC GTCGCCTTGG GCGAACGCGA TTGCTCGCTG CAGCGGCGCA ATCAGAAAGT GATCGAGGAG ACGCCCGCCC CCGGCCTGAC CGACGAGAGC CGCGCCGCGC TGCGCGAGGC CGCGATCGCG TTGGGCCAGG CGGTCAATTA TGAATCCGCG GGAACGGTCG AATTTGTATA TGACGCGGAT CAGCAAAAAT TCTATTTCCT TGAAGTCAAT ACGAGACTGC AGGTCGAGCA TTGCGTCACC GAAATGGTGT TTGGCGTCGA TCTGGTTGAA TGGATGGTGC GTCAGGCGGC GGGCGAATTC GCCCTTCCAG CCCAAAGCAG CCTGCAAGCC AAAGGCGCGG CGATCGAGGC GCGCGTCTAT GCTGAAGATG CGTCGAAGGA TTTTCGGCCG TCGACGGGCC TGCTCACGCG CGTAAAATTC CCCGATGACG TCCGCGTCGA CGGCTGGATC GAAACGGGCG TCGAAGTCTC GCCCTATTAT GATCCGCTGC TGGCGAAGGT GATCGCCGCC GGCGCCACCC GCGAGGAGGC GATCGGCAAA CTCTCCCGCG CGCTGCTCGC CAGCGATATC TCGGGCATCG AGAGCAATCT TTCCTATCTC GCGGCGATCC TCGACCTGCC GGCGTTCCGC AGCGGCGAGA TGATCACGAA GACGCTCAGC GAGTTCGCCT TTGCGCCGCG GACGGTTGAC GTGCTGGCGG GCGGCACGCT GTCGAGCATT CAGGATTGGC CGGGACGGCT TGGCTATTGG AATGTCGGGG CGCCGCCATC CGGACCGATG GATGACCGGC ATTTTCGTCA GGCCAACAGG ATCGTCGGCA ATCTCGAAGG CGCCGCCGGG CTCGAACTCA CCCTGCGCGG CCCGACGCTG AAATTCAACG TCGATACGGT GATCGCCCTC ACCGGCGCGC GCATGGCGGC GACGCTGGAT GGCGCCCCTG TCCCCTATGA TCAGCCGGTC GCCGTCACGC ACGGACAGGT GTTGACTCTT GGCGCGGTCG TGGGTCCTGG CAACCGGACC TATCTCGCGA TCCGCAACGG TTTTGAAGCG CCGGACTATC TTGGCTCGAA GGCGACATTT GCGCTCGGAA AATTCGGCGG CCATGCGGCG GGGACGCTTC GCACCGGCGA TGTATTGCGC GTTGCGTCGG TCGGCGCCGT CGCTGCGCCG CGCGAGCAAC AGGCGAGCGC GGACCTGTCG CATCGATGGG AGATCGATGT GCTCTACGGT CCGCATGGCG CGCCGGATTT CTTTACCGAT GAAGACATAG GGGAGCTGTT CGCAACAGAC TATGAGGTGC ATTACAACAG CGCGCGCACC GGCGTGAGGC TGATCGGGCC AAAGCCCCGC TTTGCGCGTC CGGACGGCGG CGAGGCGGGC CTCCACCCCT CAAATATCCA TGATAACGCT TACGCGATCG GCGCGGTGGA TTTCACCGGC GACATGCCGA TCATTTTGGG ACCGGACGGC CCGAGTCTCG GCGGCTTCGT CTGTCCCGTG GTGATCGTCA AAAGCGACCT TTGGAAGATG GGCCAGCTGC GGCCGGGCGA CAAGGTCCGC TTCCGGCCCG CGCCCAATGC GGCCGGCGCG CGGGAGCTTG GCGATCCGAT CCTGCGTCAA TATGGAGAAG GCGACGGCGC CGTCTGCTGC CGCCGCGCCG GCGACAGCTA TCTGCTGATT GAATTTGGAC CCCTCGCGCT CGATCTCGGC TTGCGCCTTC GCGCCCATCT CCTGCATGAA GCTTTGCTCG CGGCCGCGAT CGACGGCGTC ATCGATCTGA CGCCCGGCAT AAGATCGCTG CAACTCCATT ATGATCCCAA TATCATATCG CAGGAGAGGC TGCTGGAGCG GACGGTGGAG CTTGAACGCG CTCTTCCGCC GGTGGACGAA GTCGAGATCG AAAGCCGCAT CGTGCATCTG CCGGTGTCGT GGAACGATGT TGAGGCGCAG CTCGCCATGC GCAAATATCA GGAGCTTGTG CGGCCCGACG CGCCCTGGTG CCCGTCGAAT ATCGAATTCA TCCGCCGGAT CAACGGCCTC GACAGCATCG AGGCGGTGCG CGACATTATC TTCAACGCGA GCTATCTCGT GATGGGGCTT GGCGACGTCT ATCTCGGCGC GCCGGTGGCG ACGCCGATCG ATCCGCGCCA TCGTCTCGTC ACAACGAAAT ACAATCCAGC GCGAACCTGG ACTCCCGAGA ACGCAGTCGG CATCGGCGGC GCCTATATGT GCGTCTATGG CATGGAGGGT CCGGGCGGCT ATCAGCTGTT TGGCCGCACC ATACAGATGT GGAACAGCTG GCGCTCGACC GATGTTTTCG AGCGCGGCAA GCCGTGGCTG TTGCGTTTCT TCGATCAGAT CCGCTTCTAT CCCGTCAGCG GCGAGGAGCT GGCCGACGCG CGAGAGGCTT TTCCGCACGG CCGCTATCCC CTGAAAATCG AGCCGGCGAG GTTCAGCCTG AAACAACATA AGGCGTTTCT TGCCGACCAT GCCGAGGAGA TTGAAACGGC GCAGACGCGC CAGCGCGCAG CCTTCGAAGC GGAGCGTCGC CGCTGGGAGG AGCAGGGTCT CAGCCTCTTC GTCGAGGATC AAACGTCCGA CCCGTTGGAG GACGCTGTGC TGCCCGATAA CGCGATTGCG GTCGAAGCGC CGATGCCGGG AAACGTCTGG AAGATCGAGG CGGCGGTCGG CGATACGGTC GCTATCGGCG ACACATTGGT TGTGCTGGAA TCGATGAAAA TGGAAATCGC GATTCCGGCT CCGGCGGCCG GCCGCATTGC CGAGATCGCC TGTCAGGCGG GACGCCCGGT GCAGAATGGC CAGAGACTTG TGGTGATCGC GATGGAGGAC GCAAGATGA
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Protein sequence | MFSKVLIANR GEIVGRVVRT LRKMGVGSVA VYSDADRFSP TVLAADEQAR LGPPPAAQSY LNVEAVIAAC KATGAEAVHP GYGFLSENPG FAERLAAEGI KFIGPQPQHM RSFGLKHSAR EVAQRANAPL LPGSGLLDSA EDALKEAERI GYPVMLKSTA GGGGIGMQLC FGPDELAARF ESVRRLGANN FGDNRVYLEK FVARARHVEV QIFGDGKGGV VALGERDCSL QRRNQKVIEE TPAPGLTDES RAALREAAIA LGQAVNYESA GTVEFVYDAD QQKFYFLEVN TRLQVEHCVT EMVFGVDLVE WMVRQAAGEF ALPAQSSLQA KGAAIEARVY AEDASKDFRP STGLLTRVKF PDDVRVDGWI ETGVEVSPYY DPLLAKVIAA GATREEAIGK LSRALLASDI SGIESNLSYL AAILDLPAFR SGEMITKTLS EFAFAPRTVD VLAGGTLSSI QDWPGRLGYW NVGAPPSGPM DDRHFRQANR IVGNLEGAAG LELTLRGPTL KFNVDTVIAL TGARMAATLD GAPVPYDQPV AVTHGQVLTL GAVVGPGNRT YLAIRNGFEA PDYLGSKATF ALGKFGGHAA GTLRTGDVLR VASVGAVAAP REQQASADLS HRWEIDVLYG PHGAPDFFTD EDIGELFATD YEVHYNSART GVRLIGPKPR FARPDGGEAG LHPSNIHDNA YAIGAVDFTG DMPIILGPDG PSLGGFVCPV VIVKSDLWKM GQLRPGDKVR FRPAPNAAGA RELGDPILRQ YGEGDGAVCC RRAGDSYLLI EFGPLALDLG LRLRAHLLHE ALLAAAIDGV IDLTPGIRSL QLHYDPNIIS QERLLERTVE LERALPPVDE VEIESRIVHL PVSWNDVEAQ LAMRKYQELV RPDAPWCPSN IEFIRRINGL DSIEAVRDII FNASYLVMGL GDVYLGAPVA TPIDPRHRLV TTKYNPARTW TPENAVGIGG AYMCVYGMEG PGGYQLFGRT IQMWNSWRST DVFERGKPWL LRFFDQIRFY PVSGEELADA REAFPHGRYP LKIEPARFSL KQHKAFLADH AEEIETAQTR QRAAFEAERR RWEEQGLSLF VEDQTSDPLE DAVLPDNAIA VEAPMPGNVW KIEAAVGDTV AIGDTLVVLE SMKMEIAIPA PAAGRIAEIA CQAGRPVQNG QRLVVIAMED AR
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