Gene Msil_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2606 
Symbol 
ID7093260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2844841 
End bp2848359 
Gene Length3519 bp 
Protein Length1172 aa 
Translation table11 
GC content63% 
IMG OID643465921 
Producturea carboxylase 
Protein accessionYP_002362891 
Protein GI217978744 
COG category[E] Amino acid transport and metabolism
[I] Lipid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID[TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0287573 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCA AGGTTCTGAT CGCCAACAGA GGCGAGATCG TCGGCCGCGT CGTGCGCACC 
TTGCGCAAGA TGGGCGTCGG CTCCGTCGCT GTTTACTCTG ACGCCGATCG CTTCTCGCCA
ACCGTGCTTG CGGCGGACGA ACAGGCAAGG CTCGGGCCCC CGCCCGCCGC GCAAAGCTAT
CTCAATGTCG AGGCGGTCAT CGCCGCCTGC AAGGCGACAG GCGCCGAGGC GGTGCATCCG
GGCTACGGGT TTTTGAGCGA GAACCCCGGC TTCGCCGAAA GGCTGGCCGC GGAAGGGATC
AAATTCATAG GCCCTCAACC GCAACATATG CGCTCTTTCG GCCTCAAGCA TAGCGCGCGC
GAGGTGGCGC AGCGCGCCAA CGCGCCGCTG CTGCCGGGGA GCGGCCTGCT CGACTCGGCC
GAGGACGCGC TGAAGGAAGC CGAGCGCATC GGCTATCCGG TGATGTTGAA AAGCACCGCC
GGCGGCGGCG GCATCGGCAT GCAGCTTTGT TTTGGCCCGG ATGAATTGGC TGCGCGATTT
GAATCGGTGC GACGGCTCGG GGCGAATAAT TTCGGCGACA ATCGCGTCTA TCTCGAAAAA
TTCGTTGCGC GCGCGCGGCA TGTCGAGGTG CAGATTTTCG GCGACGGCAA AGGCGGCGTC
GTCGCCTTGG GCGAACGCGA TTGCTCGCTG CAGCGGCGCA ATCAGAAAGT GATCGAGGAG
ACGCCCGCCC CCGGCCTGAC CGACGAGAGC CGCGCCGCGC TGCGCGAGGC CGCGATCGCG
TTGGGCCAGG CGGTCAATTA TGAATCCGCG GGAACGGTCG AATTTGTATA TGACGCGGAT
CAGCAAAAAT TCTATTTCCT TGAAGTCAAT ACGAGACTGC AGGTCGAGCA TTGCGTCACC
GAAATGGTGT TTGGCGTCGA TCTGGTTGAA TGGATGGTGC GTCAGGCGGC GGGCGAATTC
GCCCTTCCAG CCCAAAGCAG CCTGCAAGCC AAAGGCGCGG CGATCGAGGC GCGCGTCTAT
GCTGAAGATG CGTCGAAGGA TTTTCGGCCG TCGACGGGCC TGCTCACGCG CGTAAAATTC
CCCGATGACG TCCGCGTCGA CGGCTGGATC GAAACGGGCG TCGAAGTCTC GCCCTATTAT
GATCCGCTGC TGGCGAAGGT GATCGCCGCC GGCGCCACCC GCGAGGAGGC GATCGGCAAA
CTCTCCCGCG CGCTGCTCGC CAGCGATATC TCGGGCATCG AGAGCAATCT TTCCTATCTC
GCGGCGATCC TCGACCTGCC GGCGTTCCGC AGCGGCGAGA TGATCACGAA GACGCTCAGC
GAGTTCGCCT TTGCGCCGCG GACGGTTGAC GTGCTGGCGG GCGGCACGCT GTCGAGCATT
CAGGATTGGC CGGGACGGCT TGGCTATTGG AATGTCGGGG CGCCGCCATC CGGACCGATG
GATGACCGGC ATTTTCGTCA GGCCAACAGG ATCGTCGGCA ATCTCGAAGG CGCCGCCGGG
CTCGAACTCA CCCTGCGCGG CCCGACGCTG AAATTCAACG TCGATACGGT GATCGCCCTC
ACCGGCGCGC GCATGGCGGC GACGCTGGAT GGCGCCCCTG TCCCCTATGA TCAGCCGGTC
GCCGTCACGC ACGGACAGGT GTTGACTCTT GGCGCGGTCG TGGGTCCTGG CAACCGGACC
TATCTCGCGA TCCGCAACGG TTTTGAAGCG CCGGACTATC TTGGCTCGAA GGCGACATTT
GCGCTCGGAA AATTCGGCGG CCATGCGGCG GGGACGCTTC GCACCGGCGA TGTATTGCGC
GTTGCGTCGG TCGGCGCCGT CGCTGCGCCG CGCGAGCAAC AGGCGAGCGC GGACCTGTCG
CATCGATGGG AGATCGATGT GCTCTACGGT CCGCATGGCG CGCCGGATTT CTTTACCGAT
GAAGACATAG GGGAGCTGTT CGCAACAGAC TATGAGGTGC ATTACAACAG CGCGCGCACC
GGCGTGAGGC TGATCGGGCC AAAGCCCCGC TTTGCGCGTC CGGACGGCGG CGAGGCGGGC
CTCCACCCCT CAAATATCCA TGATAACGCT TACGCGATCG GCGCGGTGGA TTTCACCGGC
GACATGCCGA TCATTTTGGG ACCGGACGGC CCGAGTCTCG GCGGCTTCGT CTGTCCCGTG
GTGATCGTCA AAAGCGACCT TTGGAAGATG GGCCAGCTGC GGCCGGGCGA CAAGGTCCGC
TTCCGGCCCG CGCCCAATGC GGCCGGCGCG CGGGAGCTTG GCGATCCGAT CCTGCGTCAA
TATGGAGAAG GCGACGGCGC CGTCTGCTGC CGCCGCGCCG GCGACAGCTA TCTGCTGATT
GAATTTGGAC CCCTCGCGCT CGATCTCGGC TTGCGCCTTC GCGCCCATCT CCTGCATGAA
GCTTTGCTCG CGGCCGCGAT CGACGGCGTC ATCGATCTGA CGCCCGGCAT AAGATCGCTG
CAACTCCATT ATGATCCCAA TATCATATCG CAGGAGAGGC TGCTGGAGCG GACGGTGGAG
CTTGAACGCG CTCTTCCGCC GGTGGACGAA GTCGAGATCG AAAGCCGCAT CGTGCATCTG
CCGGTGTCGT GGAACGATGT TGAGGCGCAG CTCGCCATGC GCAAATATCA GGAGCTTGTG
CGGCCCGACG CGCCCTGGTG CCCGTCGAAT ATCGAATTCA TCCGCCGGAT CAACGGCCTC
GACAGCATCG AGGCGGTGCG CGACATTATC TTCAACGCGA GCTATCTCGT GATGGGGCTT
GGCGACGTCT ATCTCGGCGC GCCGGTGGCG ACGCCGATCG ATCCGCGCCA TCGTCTCGTC
ACAACGAAAT ACAATCCAGC GCGAACCTGG ACTCCCGAGA ACGCAGTCGG CATCGGCGGC
GCCTATATGT GCGTCTATGG CATGGAGGGT CCGGGCGGCT ATCAGCTGTT TGGCCGCACC
ATACAGATGT GGAACAGCTG GCGCTCGACC GATGTTTTCG AGCGCGGCAA GCCGTGGCTG
TTGCGTTTCT TCGATCAGAT CCGCTTCTAT CCCGTCAGCG GCGAGGAGCT GGCCGACGCG
CGAGAGGCTT TTCCGCACGG CCGCTATCCC CTGAAAATCG AGCCGGCGAG GTTCAGCCTG
AAACAACATA AGGCGTTTCT TGCCGACCAT GCCGAGGAGA TTGAAACGGC GCAGACGCGC
CAGCGCGCAG CCTTCGAAGC GGAGCGTCGC CGCTGGGAGG AGCAGGGTCT CAGCCTCTTC
GTCGAGGATC AAACGTCCGA CCCGTTGGAG GACGCTGTGC TGCCCGATAA CGCGATTGCG
GTCGAAGCGC CGATGCCGGG AAACGTCTGG AAGATCGAGG CGGCGGTCGG CGATACGGTC
GCTATCGGCG ACACATTGGT TGTGCTGGAA TCGATGAAAA TGGAAATCGC GATTCCGGCT
CCGGCGGCCG GCCGCATTGC CGAGATCGCC TGTCAGGCGG GACGCCCGGT GCAGAATGGC
CAGAGACTTG TGGTGATCGC GATGGAGGAC GCAAGATGA
 
Protein sequence
MFSKVLIANR GEIVGRVVRT LRKMGVGSVA VYSDADRFSP TVLAADEQAR LGPPPAAQSY 
LNVEAVIAAC KATGAEAVHP GYGFLSENPG FAERLAAEGI KFIGPQPQHM RSFGLKHSAR
EVAQRANAPL LPGSGLLDSA EDALKEAERI GYPVMLKSTA GGGGIGMQLC FGPDELAARF
ESVRRLGANN FGDNRVYLEK FVARARHVEV QIFGDGKGGV VALGERDCSL QRRNQKVIEE
TPAPGLTDES RAALREAAIA LGQAVNYESA GTVEFVYDAD QQKFYFLEVN TRLQVEHCVT
EMVFGVDLVE WMVRQAAGEF ALPAQSSLQA KGAAIEARVY AEDASKDFRP STGLLTRVKF
PDDVRVDGWI ETGVEVSPYY DPLLAKVIAA GATREEAIGK LSRALLASDI SGIESNLSYL
AAILDLPAFR SGEMITKTLS EFAFAPRTVD VLAGGTLSSI QDWPGRLGYW NVGAPPSGPM
DDRHFRQANR IVGNLEGAAG LELTLRGPTL KFNVDTVIAL TGARMAATLD GAPVPYDQPV
AVTHGQVLTL GAVVGPGNRT YLAIRNGFEA PDYLGSKATF ALGKFGGHAA GTLRTGDVLR
VASVGAVAAP REQQASADLS HRWEIDVLYG PHGAPDFFTD EDIGELFATD YEVHYNSART
GVRLIGPKPR FARPDGGEAG LHPSNIHDNA YAIGAVDFTG DMPIILGPDG PSLGGFVCPV
VIVKSDLWKM GQLRPGDKVR FRPAPNAAGA RELGDPILRQ YGEGDGAVCC RRAGDSYLLI
EFGPLALDLG LRLRAHLLHE ALLAAAIDGV IDLTPGIRSL QLHYDPNIIS QERLLERTVE
LERALPPVDE VEIESRIVHL PVSWNDVEAQ LAMRKYQELV RPDAPWCPSN IEFIRRINGL
DSIEAVRDII FNASYLVMGL GDVYLGAPVA TPIDPRHRLV TTKYNPARTW TPENAVGIGG
AYMCVYGMEG PGGYQLFGRT IQMWNSWRST DVFERGKPWL LRFFDQIRFY PVSGEELADA
REAFPHGRYP LKIEPARFSL KQHKAFLADH AEEIETAQTR QRAAFEAERR RWEEQGLSLF
VEDQTSDPLE DAVLPDNAIA VEAPMPGNVW KIEAAVGDTV AIGDTLVVLE SMKMEIAIPA
PAAGRIAEIA CQAGRPVQNG QRLVVIAMED AR