| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2593 |
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| Symbol | |
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| ID | 7093247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2832872 |
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| End bp | 2834698 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643465908 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002362878 |
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| Protein GI | 217978731 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.0703266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGC CAAAGAGGAA ATTCAAGTTC GACCCCGATT CGATCGGAAA GGCCGGGCCG
GTGAAATCCA TCGCGGAGGC GGGGCGCCGC GCGTCAGGCG ATCTCGTCGC AAAGACCTTG
GCGAATACCG GCGACCTCAA AGCGCAGGAC GAATCGTTTA GGCTGCTGTT CGAGGGCGGC
CCTATCCCCA CGGCTTTGTG CGATCCGGAG TCGGCGCGAT TTCTCGTCGT CAATGACGCG
GCGGCCGCGC TGTGGGGGTT TTCGGCGTCC GAGTTGCTGG CGATGACGGC TTTCGACATC
ACGCCCGAGG AGGATTGGGA GGAGGTGCGG GCCTTTGCAA CGCGCGATCC GGAAAGCGCG
GCGAACCCGC GCGTCGGTCG CCATCTCAGA TCCGACCGAA GCGTGATCCA CGTCGTCGTG
CATTCCCGCG CGATCGTCTT TCGCGACGGC CCGGCCATTC TCGTCACCAT CATAGACGTC
ACGGACAAGC AGCGCGCCGA GCTTCGACTG GCGCATCTTG AGCATCATGA CGCGCTGACA
GATCTGCCCA ATCGCGCGCT CTTCCGCATC AGGCTCGACG AGGCTTTGTC GCGTCTCGAC
TCCGGGCAGG GTGAAATCGC CGTGCTTTAT CTCGATCTGG ATCAGTTCAA GGCGATCAAC
GACACGCTTG GCCACACGGT CGGCGACGCG CTGCTTCGCG CTGTCGCGGA TCGGCTGCGC
GCCTGTCTGC GCCCGGGCGA TACGCTGGCG CGTTTCGGCG GGGACGAATT CGCTTTTCTC
TGCGGGCGCC TTGCCGGACC GGATGAAGCC GGCAAGCTCG CCTCTTTGAT TGTGGATGAG
GTGGGCGGCC CCTATGTCAT CCAGGGTCAT TGCGTCGAAA TCGGCGCCAG CATTGGCGTT
GCGATGGCCC CCGGGGACGG GCGCGACTCG GATTTGCTCC TGAAACACGC GGATATGGCG
TTGTACCGGG CGAAAGAAGA GGGACGGCGC GCGTTTCGCT TCTTCGAGCC CGAGATGGAC
GCGCGGGCGC AGGCGCGGCG ACAGCTTGAG GCCGATCTTC GCCAAGCTCT CATCGCCTCC
GAGTTCGAGC TGCATTATCA GCCCCTCGTC GCCTTGCAGA CGGGCGCCAT CACCGGGTTC
GAGGCGCTGT TGCGGTGGCG CCATCCGATC CGCGGCATGA TTCCCCCGGC CGCCTTCATA
GGCCTTGCGG AAGAAACCGG CCTGATTGTC CCGCTTGGCG AATGGGCGCT GCGCCAGGCT
TGCGCCGAGG CGGCGAAATG GCCCAATCAT CTCAAGGTCG CCGTCAATCT GTCGTCAGTG
CAATTCAAGC GCGGCGATCT GATCCATTCG GTGCTGACCG CGCTCGCCAA TTCCGGGCTG
CCCGCCTCGC GGCTTGAGCT TGAGATCACC GAATCGATCC TGCTCGCTGA GAGCGAAGCC
AATCTCGCGA CCCTGCACAG AATGCGCAGC CTCGGGGTCA GCGTATCGAT GGATGATTTT
GGCATCGGCT ATTCGAGCCT TAGCTATTTG CGCGCCTTCC CTTTCGACAA GATCAAGATC
GACCGTTCCT TTGTGAGCGA ACTTGGCCAT GGATGCGGCT CCAGGGCGAT CGTGCGCGCC
GTCGCGGGCC TTGGCTCCAG CCTTGGCGTT TCGACAACGG CGGAAGGCGT CGAGACGAGC
GAGCAACTCG CTTGGCTTCG CGCCGAAGGC TGCACGGAAA TGCAGGGCTT TTACTTCAGC
CCCCCGGTGC CCGCCAGCAA GATTGCGCCA ATGTTAAAGG CCAATGAAAC CGCCGATCCC
CGATTCGCGC CTTTGCTCAA GCATTAG
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| Protein sequence | MAAPKRKFKF DPDSIGKAGP VKSIAEAGRR ASGDLVAKTL ANTGDLKAQD ESFRLLFEGG
PIPTALCDPE SARFLVVNDA AAALWGFSAS ELLAMTAFDI TPEEDWEEVR AFATRDPESA
ANPRVGRHLR SDRSVIHVVV HSRAIVFRDG PAILVTIIDV TDKQRAELRL AHLEHHDALT
DLPNRALFRI RLDEALSRLD SGQGEIAVLY LDLDQFKAIN DTLGHTVGDA LLRAVADRLR
ACLRPGDTLA RFGGDEFAFL CGRLAGPDEA GKLASLIVDE VGGPYVIQGH CVEIGASIGV
AMAPGDGRDS DLLLKHADMA LYRAKEEGRR AFRFFEPEMD ARAQARRQLE ADLRQALIAS
EFELHYQPLV ALQTGAITGF EALLRWRHPI RGMIPPAAFI GLAEETGLIV PLGEWALRQA
CAEAAKWPNH LKVAVNLSSV QFKRGDLIHS VLTALANSGL PASRLELEIT ESILLAESEA
NLATLHRMRS LGVSVSMDDF GIGYSSLSYL RAFPFDKIKI DRSFVSELGH GCGSRAIVRA
VAGLGSSLGV STTAEGVETS EQLAWLRAEG CTEMQGFYFS PPVPASKIAP MLKANETADP
RFAPLLKH
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