| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2587 |
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| Symbol | trmE |
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| ID | 7093241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2825930 |
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| End bp | 2827276 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643465902 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_002362872 |
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| Protein GI | 217978725 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.147171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGAATGGGT TAGAGGGTTC CGCGCCGATC GGGCGCAGCG GAGATACGAT CTTCGCCGTC
GCCTCGGGCG CCGGGCGCGC GGCGGTTGCG ATTCTGCGCC TTACGGGACC GGCCAGCGGC
GCGATTGTCA AGGCCGTCGC GGGACGCCTG CCGCCTCCTC GCGTCGCGAC GCTGGCGACG
TTCAGAGATC CGGCGACAGG CGAAGCGATC GATCAAGGGC TCGTCATTTT TTTTCAAGGT
CCGCGCAGCT ATACCGGCGA AGACAGCGCT GAATTTCACA TCCATGGCGG GCGGGCGGTG
GTCGCCGGGC TGATCGCGGC GATCGGCTCT TTCGAGGGCG CGCGCGCGGC GGAAGCGGGC
GAATTTTCGC GCCGCGCCTT GATGAATGGC AAGCTGGATC TTGGACAGAT CGAGGGGATC
GGCGATCTTG TCGCCGCCGA AACCGCATCG CAGAGGCGTC AGGCGTTGCG GCAGACGGCG
GGGATGCTGG GGCGGCGCGC CGGCGGCTGG CGGGCCGCCT TGATTGAAGC CTCCGCGCGG
ATTGCAGCCG ACATCGATTT TTCCGATGAA GGCGATGTCG CCGCGGCGCC CGCGCTCGAC
ATCGCTCCCA TCATCGCGCC TGTGCTTGCC GAATTGCGGG GCGAGCTTCA TGCGGCCCGC
GCCGGCGAGC GGATCAGGGA GGGGCTGACC ATCGTTATCG CCGGGCCGCC CAACGCGGGG
AAATCGACGC TGCTCAACGC TCTGGCCCGC CGCGATGTGG CGATTGTATC GAAACACGCC
GGAACCACGC GGGATGTGCT GGAGGTCGAA CTTGATCTTG GCGGTTATGC CGCGGTGCTG
ATCGACACCG CGGGGCTGCG CGAGACGACC GACCCGGTCG AGCAGATCGG CGTCTCGCGC
GCTCTGGAGC GGGCGCAAAA CGCCGATCTT GTGCTTTGGC TAAGCGAGCT TGGAGACTTT
CAGGCGCCCG ACGCGAGATT GACCGACGCC GAGCTGTGGC AGGTCGCAAC GAAAGCGGAT
CTGGCGCCGA GCGCGCAAGC GGAGGCGGCG CTTTGCATCA GCGCGGCGAG CGGCCTCAAC
CTCGATGTGT TGCTCGACCG GCTGGCGCAA TTTGCCGCAG AAGCTGGCGG GGCGGGTCAC
GACGGCGTCA TAACGCGAGA ACGCCATCGG AAATCCATCG CCGAGGCGGA GAGCGCTTTG
GCCCGCATCC TGTCGGATTC CGCGCCTGTG GAGATCGTCG CCGAGGATTT GCGGGCGGCT
CTTTTCGCGC TGGAGAGACT CGTCGGCCGG GTTGATGTAG AAGACATCCT TGGCGATATT
TTTTCACGGT TCTGCATCGG GAAATAG
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| Protein sequence | MNGLEGSAPI GRSGDTIFAV ASGAGRAAVA ILRLTGPASG AIVKAVAGRL PPPRVATLAT
FRDPATGEAI DQGLVIFFQG PRSYTGEDSA EFHIHGGRAV VAGLIAAIGS FEGARAAEAG
EFSRRALMNG KLDLGQIEGI GDLVAAETAS QRRQALRQTA GMLGRRAGGW RAALIEASAR
IAADIDFSDE GDVAAAPALD IAPIIAPVLA ELRGELHAAR AGERIREGLT IVIAGPPNAG
KSTLLNALAR RDVAIVSKHA GTTRDVLEVE LDLGGYAAVL IDTAGLRETT DPVEQIGVSR
ALERAQNADL VLWLSELGDF QAPDARLTDA ELWQVATKAD LAPSAQAEAA LCISAASGLN
LDVLLDRLAQ FAAEAGGAGH DGVITRERHR KSIAEAESAL ARILSDSAPV EIVAEDLRAA
LFALERLVGR VDVEDILGDI FSRFCIGK
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