| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2583 |
|---|
| Symbol | |
|---|
| ID | 7093237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2818973 |
|---|
| End bp | 2821207 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643465898 |
|---|
| Product | primosome assembly protein PriA |
|---|
| Protein accession | YP_002362868 |
|---|
| Protein GI | 217978721 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
|---|
| TIGRFAM ID | [TIGR00595] primosomal protein N' |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.366109 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGCTG CCGAAAGCGT GCAAAGCGTC GTCGACGTGC TGTTTCCGGT CGCCGTCGAC
ACCGCCTATT CCTATGTCGC CCCCGCCGCG ATGGGCCTCG TCCCCGGCGC TTTCGTCGAA
GCGCCGCTCG GACCGCGGCG GGCGATCGGC GTCGTTTTCG CGCAGCGCCC GGCCCCGCCC
GGCGCCTCCA ATCTGCGCGC CGTCGCCGCC CGGCTCGACA TCTCCCCGCT TGGCGACCGC
CTGCGCGACT TTATCGACTG GGTCGCGCGC TGGGGCATGA GCCCGCGCGG CATGGTGTTG
CGGATGGCGA TCCGCGCCCC GTTTCACGCC GCGCCCGAGC CGAAGCGGGT CGGCCTGCGC
CTGACCGGCG CCGCGCCGGC CCGCCTCACT CCGGCGCGGG AGCGGACGCT GGCCGCGGCG
CAAGCGGGCG GCCTGATGAC GAAGGCGGCG CTGGCCAAAG CGGCCGGGGT TTCGGCCTCG
GTCATCGACG GGCTCATCCG TCAGGGCGTC TTCACGCTCG AAACCTTGGC GCCTGAGCCT
GCCGCGCCGG TCGGCGATCC CGATTTCCGC CAGCCGCTGC TTTCGCAAGA TCAGGCCGCC
GCCGCCGCCG AGCTGGCGAA AGCCGTCTTG GCGCAGAGCT TTTCGGTGAC GCTGCTCGAA
GGCGTCACAG GCTCGGGCAA GACCGAAACC TATTTCGAGG CGATCGCCGC CGCTCTCCGC
GCCGGGCGCC AGACGCTGGT GCTGCTGCCG GAAATCGCCC TGACCAGCCA GTTCGTCGAC
CGTTTTGGCG CGCGTTTCGG AGCCGCGCCG GTCGAGTGGC ATTCAGGGAT AGGCGCCGCG
CGGCGTGCAA GGATCTGGAG CGCTGTCGCT TCAGGCGAGG CGAAAATCAT CATCGGCGCG
CGCTCGGCGT TGTTTTTGCC GTTTCAATCG CTGGGGCTCG TCATCGTCGA CGAGGAGCAT
GACGGCGCCT ACAAGCAGGA GGACGGCGTC GTCTATCACG CCCGCGACAT GGCGGTGGTG
CGCGGCCGGA TCGAGCAATG CGCAGTGATC CTCGCCAGCG CGACGCCCTC CATCGAGACG
CGGGTCAACG CCGATCAGGG CCGCTACCGG CGCCTGGTGC TGAAAGACCG ATTTGGCGGC
CGCGCCATGC CGAAGATCGA GGCGGTCGAT ATGCGGCTCA AGCCGCCGCC GCGCGGCAAA
TGGATTTCGC CTGCGCTGAT CGCCGCACTC GCCGACAATC TCGGCAAGGG CCAGCAATCG
CTGCTGTTCT TAAACCGGCG CGGCTATGCG CCGCTGACGC TCTGCCGTAG CTGCGGCCAT
CGGTTCCAAT GCCCGAATTG CGCGGCGTGG CTCGTCGATC ATCGCTTTCG CAAGGCGCTG
ATCTGCCACC ATTGCGGCCA TATGGAGCGC CGTCCGGAGC TTTGCCCCAA TTGCGAGGCG
GTTGAATCCC TGATGGCTTG TGGGCCGGGC GTCGAGCGGC TGGAGGAGGA GGCCGCCGAG
CTGTTTCCCG ACGCGCGGCT CATGATCCTG TCGTCCGATC TGGCGGGAGG CGCGGAGCGG
CTCAGGGCCG AATTCGAAGC GGTGGCGCGC GGCGCCTGCG ACATCGTGAT CGGCACGCAG
CTGGTCGCCA AGGGCCATAA TTTTCCGGGG CTGACGCTGG TCGGCGTCAT CGACGCCGAT
ATCGGCCTGA CCTCGGGCGA TCCGCGCGCG GCGGAGCGCA CCTTTCAATT GCTGCAGCAG
GTCACCGGCC GCGCCGGCCG GTTCGAGACG CCGGGGCGCG CCCTGGTGCA AAGTTTTCAA
CCCGAGCATC CGGTGATGCG GGCGATCCTC TCCGGCGACA GCGAAAAATT TTACGCCGAG
GAAATCGAAC AGCGCCGGCG CGCCGGTCTG CCGCCATTCG GCCGGCTGGC GGCCTTGATC
GTCTCGGGCA ATGATGCGGC GTCGGCCGAG GCTTTCGCTC GCGCTTTGGC GCGGGCGGCG
CATGATCTGC CGCGCTCGGA TGGATGGACG CTCGCTGCGG CCGGAGGGTT GCCGACCGAG
GGCGAACTTT CCCTGCTCGG ACCGGCGGAG GCGCCCATCG CGATCCTGCG CGGGCGCCAC
CGCTTCCGCC TGCTCATCCG CGCGCCGCGC TCCTCCGATT TGCAGGGATT TTTGAACGCT
TTGCTTGCAG CGGGACCGCC GCAACGCGGT GGGGTGAACG CGGCGATCGA TATAGACCCG
CAAAGCTTTT TGTAG
|
|---|
| Protein sequence | MPAAESVQSV VDVLFPVAVD TAYSYVAPAA MGLVPGAFVE APLGPRRAIG VVFAQRPAPP
GASNLRAVAA RLDISPLGDR LRDFIDWVAR WGMSPRGMVL RMAIRAPFHA APEPKRVGLR
LTGAAPARLT PARERTLAAA QAGGLMTKAA LAKAAGVSAS VIDGLIRQGV FTLETLAPEP
AAPVGDPDFR QPLLSQDQAA AAAELAKAVL AQSFSVTLLE GVTGSGKTET YFEAIAAALR
AGRQTLVLLP EIALTSQFVD RFGARFGAAP VEWHSGIGAA RRARIWSAVA SGEAKIIIGA
RSALFLPFQS LGLVIVDEEH DGAYKQEDGV VYHARDMAVV RGRIEQCAVI LASATPSIET
RVNADQGRYR RLVLKDRFGG RAMPKIEAVD MRLKPPPRGK WISPALIAAL ADNLGKGQQS
LLFLNRRGYA PLTLCRSCGH RFQCPNCAAW LVDHRFRKAL ICHHCGHMER RPELCPNCEA
VESLMACGPG VERLEEEAAE LFPDARLMIL SSDLAGGAER LRAEFEAVAR GACDIVIGTQ
LVAKGHNFPG LTLVGVIDAD IGLTSGDPRA AERTFQLLQQ VTGRAGRFET PGRALVQSFQ
PEHPVMRAIL SGDSEKFYAE EIEQRRRAGL PPFGRLAALI VSGNDAASAE AFARALARAA
HDLPRSDGWT LAAAGGLPTE GELSLLGPAE APIAILRGRH RFRLLIRAPR SSDLQGFLNA
LLAAGPPQRG GVNAAIDIDP QSFL
|
|---|
| |