Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2559 |
Symbol | hslU |
ID | 7093213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2794512 |
End bp | 2795825 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643465875 |
Product | ATP-dependent protease ATP-binding subunit HslU |
Protein accession | YP_002362845 |
Protein GI | 217978698 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.358535 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT TTTCCCCCCG CGAAATCGTC TCCGAACTTG ACCGCTTCAT CGTCGGCCAG CACGACGCCA AGCGCGCCGT CGCCATTGCG CTGCGCAACC GCTGGCGGCG CCTGCGCCTC GAAGGCTCCA TGCGTGACGA GGTTCTGCCG AAAAACATCC TGATGATCGG CCCGACCGGC TGCGGCAAGA CCGAAATCTC GCGCCGCCTG GCCAAAATGG CCGGCGCGCC TTTTTTGAAG GTCGAGGCGA CCAAATTCAC CGAAATCGGC TATGTCGGAC GCGACGTCGA GCAGATTGTG CGCGATCTGG TCGAGACCGC AATTTCGATG ATCAAGGAGG ACAAGCGCAA GCTTGTCCGC GCCAAGGCTG AATTGGCGGC GGAAGATCGC ATCCTCGATG CGCTGGTCGG GCCGGGCGCC TCGCCGCCGA CCCGCGACAG CTTTCGCAAA AAGCTCCGCG CCGGCGAACT TGAAGACAAG GAGATCGAGG TCGAGATCGC GCAAGGGTCC GGCGGGGCCA TGCCGATGTT CGAACTGCCG AACATGCCGG GCGCGCAAAT CGGCGCGATG TCGCTCGGCG ACATGTTCGG CAAGGCCTTC GGCAAGGGCG GCAAGCCGCG CCGCATGAGC GTCAAGGACG CCGTCGAGCC CCTCATCACC GAGGAGGGCG ACAAGCTGAT GGATCAGGAC GTGATCGTCC GCGAAGCCAT CGTCGAAGTC GAGAACAATG GCATCGTGTT TTTGGACGAG ATCGACAAGA TCTGCGTTCG CGAAGGTTCG CGCGGCGGCG CCGACGTCTC GCGCGAGGGC GTGCAGCGCG ATCTCCTGCC GCTGATCGAG GGCGCCAATG TGCCGACCAA GCATGGGGTG GTGAAGACCG ACCATATTTT GTTCATCGCC TCGGGCGCCT TTCATGTCTC AAAGCCTTCG GACCTTTTGC CCGAATTGCA GGGGCGCCTC CCGATCCGCG TCGAACTTGC GCCGCTGACG GAGGATGATT TCCGCCGCAT CCTGACCGAC ACCGAAGCCA GCCTTCTCAA ACAATATGAA GCGCTGATGC GCACCGAAGG CGTCGAGCTC AGTTTCACGC CGGACGCCGT CAATGCGCTG GCGAAGATTG CTGCGCAGGT GAATTCCAGC GTCGAAAACA TCGGCGCGCG GCGGCTGCAG ACGGTAATGG AGCGCGTGCT CGACGAAATC AGCTTTTCCG CGACCGATCG GTTCGGCGAA AAGATCGAGA TCGACGCGGC CTATGTCGAA CAGCACATCG GCGATCTTGC GCGGAACGCG GACCTCTCCC GCTTTATTCT CTAG
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Protein sequence | MTDFSPREIV SELDRFIVGQ HDAKRAVAIA LRNRWRRLRL EGSMRDEVLP KNILMIGPTG CGKTEISRRL AKMAGAPFLK VEATKFTEIG YVGRDVEQIV RDLVETAISM IKEDKRKLVR AKAELAAEDR ILDALVGPGA SPPTRDSFRK KLRAGELEDK EIEVEIAQGS GGAMPMFELP NMPGAQIGAM SLGDMFGKAF GKGGKPRRMS VKDAVEPLIT EEGDKLMDQD VIVREAIVEV ENNGIVFLDE IDKICVREGS RGGADVSREG VQRDLLPLIE GANVPTKHGV VKTDHILFIA SGAFHVSKPS DLLPELQGRL PIRVELAPLT EDDFRRILTD TEASLLKQYE ALMRTEGVEL SFTPDAVNAL AKIAAQVNSS VENIGARRLQ TVMERVLDEI SFSATDRFGE KIEIDAAYVE QHIGDLARNA DLSRFIL
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