Gene Msil_2559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2559 
SymbolhslU 
ID7093213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2794512 
End bp2795825 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content62% 
IMG OID643465875 
ProductATP-dependent protease ATP-binding subunit HslU 
Protein accessionYP_002362845 
Protein GI217978698 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 
TIGRFAM ID[TIGR00390] ATP-dependent protease HslVU, ATPase subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.358535 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT TTTCCCCCCG CGAAATCGTC TCCGAACTTG ACCGCTTCAT CGTCGGCCAG 
CACGACGCCA AGCGCGCCGT CGCCATTGCG CTGCGCAACC GCTGGCGGCG CCTGCGCCTC
GAAGGCTCCA TGCGTGACGA GGTTCTGCCG AAAAACATCC TGATGATCGG CCCGACCGGC
TGCGGCAAGA CCGAAATCTC GCGCCGCCTG GCCAAAATGG CCGGCGCGCC TTTTTTGAAG
GTCGAGGCGA CCAAATTCAC CGAAATCGGC TATGTCGGAC GCGACGTCGA GCAGATTGTG
CGCGATCTGG TCGAGACCGC AATTTCGATG ATCAAGGAGG ACAAGCGCAA GCTTGTCCGC
GCCAAGGCTG AATTGGCGGC GGAAGATCGC ATCCTCGATG CGCTGGTCGG GCCGGGCGCC
TCGCCGCCGA CCCGCGACAG CTTTCGCAAA AAGCTCCGCG CCGGCGAACT TGAAGACAAG
GAGATCGAGG TCGAGATCGC GCAAGGGTCC GGCGGGGCCA TGCCGATGTT CGAACTGCCG
AACATGCCGG GCGCGCAAAT CGGCGCGATG TCGCTCGGCG ACATGTTCGG CAAGGCCTTC
GGCAAGGGCG GCAAGCCGCG CCGCATGAGC GTCAAGGACG CCGTCGAGCC CCTCATCACC
GAGGAGGGCG ACAAGCTGAT GGATCAGGAC GTGATCGTCC GCGAAGCCAT CGTCGAAGTC
GAGAACAATG GCATCGTGTT TTTGGACGAG ATCGACAAGA TCTGCGTTCG CGAAGGTTCG
CGCGGCGGCG CCGACGTCTC GCGCGAGGGC GTGCAGCGCG ATCTCCTGCC GCTGATCGAG
GGCGCCAATG TGCCGACCAA GCATGGGGTG GTGAAGACCG ACCATATTTT GTTCATCGCC
TCGGGCGCCT TTCATGTCTC AAAGCCTTCG GACCTTTTGC CCGAATTGCA GGGGCGCCTC
CCGATCCGCG TCGAACTTGC GCCGCTGACG GAGGATGATT TCCGCCGCAT CCTGACCGAC
ACCGAAGCCA GCCTTCTCAA ACAATATGAA GCGCTGATGC GCACCGAAGG CGTCGAGCTC
AGTTTCACGC CGGACGCCGT CAATGCGCTG GCGAAGATTG CTGCGCAGGT GAATTCCAGC
GTCGAAAACA TCGGCGCGCG GCGGCTGCAG ACGGTAATGG AGCGCGTGCT CGACGAAATC
AGCTTTTCCG CGACCGATCG GTTCGGCGAA AAGATCGAGA TCGACGCGGC CTATGTCGAA
CAGCACATCG GCGATCTTGC GCGGAACGCG GACCTCTCCC GCTTTATTCT CTAG
 
Protein sequence
MTDFSPREIV SELDRFIVGQ HDAKRAVAIA LRNRWRRLRL EGSMRDEVLP KNILMIGPTG 
CGKTEISRRL AKMAGAPFLK VEATKFTEIG YVGRDVEQIV RDLVETAISM IKEDKRKLVR
AKAELAAEDR ILDALVGPGA SPPTRDSFRK KLRAGELEDK EIEVEIAQGS GGAMPMFELP
NMPGAQIGAM SLGDMFGKAF GKGGKPRRMS VKDAVEPLIT EEGDKLMDQD VIVREAIVEV
ENNGIVFLDE IDKICVREGS RGGADVSREG VQRDLLPLIE GANVPTKHGV VKTDHILFIA
SGAFHVSKPS DLLPELQGRL PIRVELAPLT EDDFRRILTD TEASLLKQYE ALMRTEGVEL
SFTPDAVNAL AKIAAQVNSS VENIGARRLQ TVMERVLDEI SFSATDRFGE KIEIDAAYVE
QHIGDLARNA DLSRFIL