Gene Msil_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2506 
Symbol 
ID7091057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2740065 
End bp2741477 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content64% 
IMG OID643465823 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_002362793 
Protein GI217978646 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTACG ATCTCATCGT CATCGGAACC GGCCCCGGCG GCTATGTCTG CGCCATCCGC 
GCCGCCCAGC TTGGGCAGAA GGTCGCCGTC GTCGAGAAGC GCAAGACCAA GACCTTTGGC
GGCACCTGCC TCAACATTGG CTGCATCCCA TCGAAGGCGC TGCTTTACGC CTCCGAGAAA
TTCGAGGAGG CCGCCCACCA CCTTGCAGCG CTCGGCGTCG TCGTCGACAA GCCCACCCTC
GATCTCAAGG CGATGCTGAA GCACAAGGAC GACACCGTTG CGGCCAACGT CAACGGCATC
GCCTTCCTGT TCAAGAAGCA CAAAATCGAA TCCTTCTTCG GCGTCGGCGC GATCAAGAGC
GTCGCCGAAG GGGCGATCGC GGTCGAGGTC ACCGCTGAGG ACGGCGGCCA GCAGACGCTT
ACGGCGAAAA ACGTCGTGAT CGCGACGGGC TCCGACGTCG CGCCGCTCCC GGGCGTCGAG
ATTGACGAAG AGACCATTGT GTCCTCGACC GGCGCACTCA GCCTGAAGCA GCCGCCGAAG
GATCTGCTCG TCGTCGGCGC CGGCGTCATT GGCCTCGAGC TCGGCTCGGT GTGGGGGAGG
CTTGGCTCCA ATGTGACCGT CGTCGAATTT CTGGACCGGA TTCTGCCGGG GATCGACGCG
GAAGTCGCCA AGCAGTTCCA GCGCATCCTG CAGAAACAGG GCTTTACCTT CCAGCTCGGC
CATAAGGTGA CGAAGGTCGA GAAAGGCGAA CGCCTGAAAA TCACGATCGA GCCGGCCGCC
GGCGGCGATT CCCTGACCCT TGAGGCCGAT GTTGTATTGG TCGCGATTGG CCGGCGCCCC
GTGACCGAGG GGCTCGGCCT CGACAAGGTC GGCGTCGCGC TGGAGCGCGG CCGAATCATC
ATCGACGAGC GCTTCGCGAC CAATGTTCCC GGCGTCTACG CCATCGGCGA CGTCGTGCGC
GGGCCGATGC TGGCCCATAA GGCCGAGGAT GAAGGCATCG CCGCCGCCGA AATCATCGCC
GGGCAGCACG GCCATGTGAA TTATGAGGTG ATTCCCTCGG TGGTTTACAC CTCGCCGGAA
ATCGCGGCGG TCGGCGCGAC CGAGGAAGAC CTCAACGCCA AAGGGATCGC CTATAAGGTC
GGCAAATTCA ATTTTACCGC CAACGGACGG GCGCGGGCGA TGCGCCAGAC CGACGGCTTC
GTTAAATTTT TGGCCGACGC CACAACGGAT CGCGTTCTCG GCGTCCATAT CGTCGGGGCG
GGGGCCGGCG AACTGATCGC CGAAGCCTGC GTGCTGATGG AATTCGGCGG GTCGTCGGAA
GATCTGGCGC GCACCTGCCA CGCGCATCCG ACGCTCTCGG AAGCCGTGCG CGAAGCCGCC
CTCGCCGTCG AGAAGCGCCA GATTCACTCC TGA
 
Protein sequence
MSYDLIVIGT GPGGYVCAIR AAQLGQKVAV VEKRKTKTFG GTCLNIGCIP SKALLYASEK 
FEEAAHHLAA LGVVVDKPTL DLKAMLKHKD DTVAANVNGI AFLFKKHKIE SFFGVGAIKS
VAEGAIAVEV TAEDGGQQTL TAKNVVIATG SDVAPLPGVE IDEETIVSST GALSLKQPPK
DLLVVGAGVI GLELGSVWGR LGSNVTVVEF LDRILPGIDA EVAKQFQRIL QKQGFTFQLG
HKVTKVEKGE RLKITIEPAA GGDSLTLEAD VVLVAIGRRP VTEGLGLDKV GVALERGRII
IDERFATNVP GVYAIGDVVR GPMLAHKAED EGIAAAEIIA GQHGHVNYEV IPSVVYTSPE
IAAVGATEED LNAKGIAYKV GKFNFTANGR ARAMRQTDGF VKFLADATTD RVLGVHIVGA
GAGELIAEAC VLMEFGGSSE DLARTCHAHP TLSEAVREAA LAVEKRQIHS