| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2504 |
|---|
| Symbol | sucA |
|---|
| ID | 7091055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2735381 |
|---|
| End bp | 2738437 |
|---|
| Gene Length | 3057 bp |
|---|
| Protein Length | 1018 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643465821 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_002362791 |
|---|
| Protein GI | 217978644 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCC AGAACGGCAC AGAATCGAAT GGATCGGCGG GAGGTTCTGC GGGGGGTTCG
GGAGGCGCCG GCGCCGCCCG CTCCGCGTCC AACGCCGAAT TCCTGCAATC TTCCTTCCTC
TATGGCGGCA ACGCCGCCTA TGTCGAACAG CTTCAGGCGG CTTATGACGC CGACCCCAGC
TCGGTCGATC CGGAGTGGCG CGCCTTTTTC GCGCAGCTGA ACGACGACCG CGCCGCGGTC
GAGACCAGCG CCAACGGGCC GAGCTGGCGG TCGAAGAACT GGCCGATCGC GGCCAATGGC
GAGCTGATCT CGGCGCTCGA CGGCGACTGG GGCAAAGAGC AAAAGCCCGC GCCGCGCGAC
GGCAAAGCCG CCCCTGGCGC CAAACCCGCC CCCGCGGCGG AGCCGGCGCC GGGCTCCGTT
CCGACATCCG GCGCAGACGT CCAGCGCGCG ACGCGCGATT CGGTGCGGGC CCTGATGATG
ATCCGCGCCT ATCGCATGCG CGGCCATCTG CACGCCAATC TCGACCCGCT CGAGCTGCAG
CGCCCGAACG TCACCGAGGA GCTGCATCCG GCGACCTATG GCTTCACCGA GGCCGATTAC
GACCGCAAGA TCTTCCTCGA TCATGTGCTC GGGCTGGAAT TTGCGACGAT CCGCGAGATG
CTGCCGATCT TGCGCCGCAC CTATTGCGAC ACCATCGGCT TCGAATTCAT GCATATTTCG
GATCCGGCCG AGAAAGCCTG GATGCAGGAG CGCATCGAGG GGCCCGGCAA GGAAATCACC
TTCACCCGCG AGGGCAAGCG GGCGATCCTC AACAAGCTCA TCGAGGCCGA GGGCTTCGAG
AAATTCATCG ACGTCAAATA TACCGGCACC AAGCGCTTCG GCCTCGACGG CGGCGAATCC
CTGGTTCCCG CGCTGGAACA GATCATCAAG CGCGGCGGCG CGCTCGGCGT CCGCGAAATC
GTGCTCGGCA TGCCGCATCG CGGCCGCCTC AACGTGCTCT CCCAGGTCAT GGGCAAGCCG
CATCGCGCCA TTTTCCATGA ATTCAAGGGC GGTTCCTATA CGCCCGACGA AGTCGAGGGC
TCGGGCGACG TCAAATATCA TCTTGGCGCC TCCTCGGACC GCGAGTTCGA TCATAATTCG
GTCCATCTTT CGCTGACCGC CAACCCGTCC CATCTCGAAA TCGTCGATCC GGTCGTGTTG
GGCAAAGTGC GCGCCAAGCA GGACCAGCTG CATGACGTCG TCGACCGCAC CAAGGTGCTG
CCGCTTCTGC TGCATGGCGA CGCGTCCTTC GCCGGCCAGG GCGTCATCGC CGAATGTTTC
GGCCTCTCCG GCCTCAAGGG CTACCGCACC GGCGGTTCGA TCCATTTCAT CGTCAACAAT
CAGATCGGCT TCACCACATC GCCGCGCTAT TCGCGCTCCT CGCCCTATCC GTCGGATACG
GCGAAGATGA TCGAAGCGCC GATCATCCAT GTGAACGGCG ACGATCCCGA AGCCGTGGTC
TACGCCGCCA AGATCGCCAT CGAGTTCCGG CAGAAATTTC ACAAGCCGGT CGTCGTCGAC
ATGTTCTGCT ATCGCCGGTT CGGCCACAAT GAAGGCGACG AGCCGAGCTT TACGCAGCCG
ATCATGTACA AGAAGATCCG CGCGCATCGC ACGACGCTCG ACATTTACGC CGAAAAGCTT
CTGGCCGAAG GCGTCGTCGC GCCGGGCGAG ATCAGCCAGC TGCAGGCGGA CTGGCGCAGT
CACCTCGAAG CCGAATTCGA ATCCGGCAAC GCCTATCAGC CGAACAAGGC GGACTGGCTC
GACGGCCGCT GGTCGGGCCT GAAGCCCGCC AACGCCGGCG AAGACGACCG GCGCGGCCGC
ACCGGCGTCG ATCCCGTGCG GCTCAAGGAG ATCGGCGAGC GGCTCTGCGC CATCCCGGCC
AGCTTCACCG CGCATAAGAC CGTCGCTCGC CTGCTCGACA ACCGGCGCAA GATGGTCGAG
ACGGGCAAGG GCGTCGATTG GGCGATGGCC GAGGCGCTCG CTTTCGGCAC GCTGGTCGAT
GAAGGCCATC CGGTCCGGCT CTCCGGCCAG GACAGCGAGC GCGGCACCTT CTCGCAGCGT
CATTCCGTCC TGAACGATCA GGAGACGGAG GCGCGTTATG TTCCGCTGAA CCATATTCGC
GACGAACAGG CCCATTACGA GGTCATCAAT TCGATGCTCT CCGAAGAGGC CGTGCTCGGC
TTCGAATATG GGTTTTCTCT CGCCGAGCCC AGCGCTCTGG TGCTGTGGGA GGCGCAGTTC
GGCGATTTCG CCAATGGCGC GCAGGTGCTG TTCGATCAGT TCCTGTCCGC CGGCGAGCGC
AAATGGCTGC GCATGTCGGG CCTCGTCTGC CTGCTGCCGC ATGGCTATGA GGGGCAGGGG
CCAGAACATT CCTCGGCGCG GCTCGAGCGC TTCCTGCAGA TGACCGCCGA AGACAATATG
CAGGTCGCCA ATGTCACGAC GCCGGCGAAT TATTTCCATA TCCTGCGCCG GCAGCTGAAG
CGCGATTTCC GCAAGCCGCT GATCCTCATG ACGCCGAAGT CGCTGCTGCG CCACAAGCGC
GCCGTCTCCA GTTTCGACGA AATGATCATC GGCTCCTCGT TCCATCGCGT GCTGCGCGAC
CACGGCGAGA AATTCCCGAG CGAATACAAG ATCAAGCCGG ACGCCGAGAT CCGCCGCGTG
GTGCTCTGCA CCGGCAAGGT CTATTACGAT CTGCTCGAAG AGCGCGAGAA GCGCGGGATC
GAGGACGTCT ATCTGCTGCG CGTCGAGCAG CTCTACCCCT TCCCGCTGAA GGCGCTGGTC
AATCTGCTGT CGCGCTTCAA GCAGGCCGAG GTGCTGTGGT GCCAGGAAGA GCCGAAGAAC
ATGGGCGCCT GGAACCACGT CGATCCCTAT CTCGAATGGG TGCTGGGACA GGTCGGGGGC
AAATCATCGC GGCCGCGCTA CGCCGGGCGC CCGGCGTCGG CGGCGACGGC GACCGGTCTG
ATGTCAAAGC ACCTGGCCCA GCTGAAGGCC TTTATGGACG ACGTCTATGG GCCCTGA
|
|---|
| Protein sequence | MARQNGTESN GSAGGSAGGS GGAGAARSAS NAEFLQSSFL YGGNAAYVEQ LQAAYDADPS
SVDPEWRAFF AQLNDDRAAV ETSANGPSWR SKNWPIAANG ELISALDGDW GKEQKPAPRD
GKAAPGAKPA PAAEPAPGSV PTSGADVQRA TRDSVRALMM IRAYRMRGHL HANLDPLELQ
RPNVTEELHP ATYGFTEADY DRKIFLDHVL GLEFATIREM LPILRRTYCD TIGFEFMHIS
DPAEKAWMQE RIEGPGKEIT FTREGKRAIL NKLIEAEGFE KFIDVKYTGT KRFGLDGGES
LVPALEQIIK RGGALGVREI VLGMPHRGRL NVLSQVMGKP HRAIFHEFKG GSYTPDEVEG
SGDVKYHLGA SSDREFDHNS VHLSLTANPS HLEIVDPVVL GKVRAKQDQL HDVVDRTKVL
PLLLHGDASF AGQGVIAECF GLSGLKGYRT GGSIHFIVNN QIGFTTSPRY SRSSPYPSDT
AKMIEAPIIH VNGDDPEAVV YAAKIAIEFR QKFHKPVVVD MFCYRRFGHN EGDEPSFTQP
IMYKKIRAHR TTLDIYAEKL LAEGVVAPGE ISQLQADWRS HLEAEFESGN AYQPNKADWL
DGRWSGLKPA NAGEDDRRGR TGVDPVRLKE IGERLCAIPA SFTAHKTVAR LLDNRRKMVE
TGKGVDWAMA EALAFGTLVD EGHPVRLSGQ DSERGTFSQR HSVLNDQETE ARYVPLNHIR
DEQAHYEVIN SMLSEEAVLG FEYGFSLAEP SALVLWEAQF GDFANGAQVL FDQFLSAGER
KWLRMSGLVC LLPHGYEGQG PEHSSARLER FLQMTAEDNM QVANVTTPAN YFHILRRQLK
RDFRKPLILM TPKSLLRHKR AVSSFDEMII GSSFHRVLRD HGEKFPSEYK IKPDAEIRRV
VLCTGKVYYD LLEEREKRGI EDVYLLRVEQ LYPFPLKALV NLLSRFKQAE VLWCQEEPKN
MGAWNHVDPY LEWVLGQVGG KSSRPRYAGR PASAATATGL MSKHLAQLKA FMDDVYGP
|
|---|
| |