| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2451 |
|---|
| Symbol | |
|---|
| ID | 7094003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2673521 |
|---|
| End bp | 2674726 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643465772 |
|---|
| Product | formate dehydrogenase |
|---|
| Protein accession | YP_002362742 |
|---|
| Protein GI | 217978595 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.454632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGG TGCTTTGCGT TCTCTACGAC GATCCGATCA CGGGCTACCC GAAAACCTAT
GCGCGCGACG ATCTGCCGAA GATCACCCAC TACCCTGGCG GCCAGAGCCT GCCGACGCCG
AAAGCGATCG ATTTCACTCC GGGCGTGCTG CTGGGCTCGG TATCCGGCGA ACTGGGCCTG
CGCAAATATC TCGAAGCGAA CGGCCATACG CTGGTCGTCA CCTCCGACAA GGACGGACCG
GATTCGGTCT TCGAGCGCGA ACTTGTTGAC GCCGACGTGG TCATCTCGCA GCCGTTCTGG
CCGGCCTATC TGACGCCGGA GCGCTTCGCC AAGGCGAAGA ACCTCAAAAT GGCGCTGACC
GCCGGCATCG GCTCCGACCA TGTCGATCTT CAATCGGCGA TCGACCGCAA GATCACGGTT
GCGGAAGTCA CCTACTGCAA TTCGATCAGC GTCGCCGAAC ATGTGGTGAT GATGATCCTG
TCGCTCGTGC GCAATTATCT GCCTTCGCAT GAATGGGCGA AGAAGGGCGG CTGGAACATC
GCCGATTGCG TCGAACACGC CTACGACCTT GAGGCGATGC ATGTCGGCAC CGTCGCCGCC
GGGCGCATCG GTCTCGCCGT GCTGCGCCGT CTCGCACCCT TCGACGTGAA GCTGCACTAC
AATGATCGCC ACCGTCTGCC GGAATCGGTT GAGAAAGAGC TGAATCTCAC CTGGCACGCC
AACCCTGAGG AGATGTATCC CCATTGTGAC GTGGTGACGC TCAACTGCCC GCTTCACCCC
GAAACAGAGC ACATGATCAA TGAGGAAACG CTGAAGCTGT TCAAGCGAGG CGCCTATATT
GTCAACACCG CGCGCGGCAA GCTATGCGAC CGCGACGCGG TCGCGCGGGC GCTCGAAAGC
GGACAACTTG CGGGCTATGC GGGCGACGTG TGGTTCCCGC AGCCGGCGCC GAAGGATCAT
CCATGGCGCA GCATGCCCTA TAATGGCATG ACGCCGCATA TCTCGGGCAC GACGCTGACC
GCGCAGGCGC GCTATGCGGC GGGAACGCGC GAGATCCTCG AATGCTTCTT CGAGGGACGT
CCGATCCGCG ACGAATATCT CATCGTCGAA GGCGGTCATC TCGCCGGAAC GGGCGCGCAT
TCCTACAGCG CCGGCAACGC CACCGGCGGC TCCGCCGAGG CTGAGAAATT CAAGAAAGCG
GTCTGA
|
|---|
| Protein sequence | MAKVLCVLYD DPITGYPKTY ARDDLPKITH YPGGQSLPTP KAIDFTPGVL LGSVSGELGL
RKYLEANGHT LVVTSDKDGP DSVFERELVD ADVVISQPFW PAYLTPERFA KAKNLKMALT
AGIGSDHVDL QSAIDRKITV AEVTYCNSIS VAEHVVMMIL SLVRNYLPSH EWAKKGGWNI
ADCVEHAYDL EAMHVGTVAA GRIGLAVLRR LAPFDVKLHY NDRHRLPESV EKELNLTWHA
NPEEMYPHCD VVTLNCPLHP ETEHMINEET LKLFKRGAYI VNTARGKLCD RDAVARALES
GQLAGYAGDV WFPQPAPKDH PWRSMPYNGM TPHISGTTLT AQARYAAGTR EILECFFEGR
PIRDEYLIVE GGHLAGTGAH SYSAGNATGG SAEAEKFKKA V
|
|---|
| |