| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2445 |
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| Symbol | |
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| ID | 7093997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2665824 |
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| End bp | 2667098 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643465766 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_002362736 |
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| Protein GI | 217978589 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0377313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA TGCCTCCGGA TCCCGCTTTG CATCAGACGG GCCTCCGCGC CAATGAAGAG
GGGGAAGACA AGCGCAAGGA GCCCCCGCGC GAGACGGAAC GGCGCGAGCG CGGCCGCCGG
ATCATCGCGC GCCTGATCGG CTTTCTGGCG GTTGCGATCG TCGCCGGGCT GGTCGGCTTC
GGCCTCTGGA CCAAGTCGAG CCGCAATGCG GAAGCCGACG CCGCGATGGA GGCGCGGGTG
AATGCGACGC CGACCGTGCG AACGGCGATC GTCAAGGAAG ACTCGACGCC GCGCACCATC
GAGCTCACCG GCAATATGAC CGCGTTCGAC AGCGCGACGC TTTTTGCCCG CGCGACCGGC
TATATCAGCG TCCGCCACGC CGACATCGGA ACCAAGCTGA AAAAGGGCGA CGTCCTCGCG
GTCATCGCCG CGCCCGACCT CGATCAGCAG CTCGTGCAGG CGAAGGCCCA GCTCGTGCAG
TTTCAGGCCG CCGTGCAACA GGCGCAAGCC AACGCCGATC TCGGCCGCGT CACCGACCAG
CGCACCTCGC GCCTCGTCGC GCAGGGCTGG TCGAGCGCGC AACAAGGCGA CAACGACCGG
CTGACGCTCG CGGCGCGCAC CGCGGCGGTC GCCGTCGCCA AGGCCAATGT CACCGCGCAG
GAAGCGGCCG TGAGCCGGCT GCAGCAACTG ACCGAGTTCG AGCGGATCAC GGCGCCCTTC
GACGGCGTCG TCACCAGCCG CCTCGTCGAC GTCGGCAGTC TCGTGACCGC GGATGCGGCG
AGCGGAACTC CGCTGTTCTC GATGGCCCGC ACCGACGTCC TGCGCGTGCA GGCGTTTGTC
CCGCAATCGG CTACTTTCGG CATCAAGGAC GGCGACGCCG CGACGATCAC CGTCTCCGAA
CTGCCGGGCA AGACCTTCAC CGGCCATGTT GCGCGCAATG CCGAAGCGCT CTCGGCCGGC
ACGCGGACGC TGCTGATGGA GGTCGACGTC GACAACAAGG ATGGCGTCCT CAGCGCCGGC
CTCTACAGCA TCGTCCACCT CGCGGTGCGC CGGCCCAATC CTGTGATCGT CATCCCCTCG
CAGGCGGTGA TCTTCAACAA GGATGGTTTG CGCGTGGCGG TCGTCTCCGA CGGAAAGATC
GAGCTGCGCA AGATCGAGCT CGAACAGGAT AATGGCGCCA ATGTCGAAGT GCGCTCCGGC
CTCAAGAACG GCGATCGAAT CATCCTGAGC CCGCCCGCTA ATGTATCCGA CGGGATGAGC
GTCAAGACGG CCTAA
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| Protein sequence | MNSMPPDPAL HQTGLRANEE GEDKRKEPPR ETERRERGRR IIARLIGFLA VAIVAGLVGF
GLWTKSSRNA EADAAMEARV NATPTVRTAI VKEDSTPRTI ELTGNMTAFD SATLFARATG
YISVRHADIG TKLKKGDVLA VIAAPDLDQQ LVQAKAQLVQ FQAAVQQAQA NADLGRVTDQ
RTSRLVAQGW SSAQQGDNDR LTLAARTAAV AVAKANVTAQ EAAVSRLQQL TEFERITAPF
DGVVTSRLVD VGSLVTADAA SGTPLFSMAR TDVLRVQAFV PQSATFGIKD GDAATITVSE
LPGKTFTGHV ARNAEALSAG TRTLLMEVDV DNKDGVLSAG LYSIVHLAVR RPNPVIVIPS
QAVIFNKDGL RVAVVSDGKI ELRKIELEQD NGANVEVRSG LKNGDRIILS PPANVSDGMS
VKTA
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