| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2443 |
|---|
| Symbol | |
|---|
| ID | 7093995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2661808 |
|---|
| End bp | 2662521 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643465764 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_002362734 |
|---|
| Protein GI | 217978587 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0506357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC AGACAGATAA ATTCGAACCT CCCGCGCCTG CGCCAAGCAA GCGCCTTGCC
GCGCGCCGGC AGGCGTTCCT TGAGGCGGCG CGCGTCGTGT TCGAGGATAA GGGCTTCGCC
GCCGCAACGA TCGACGAGGT GATCGCCTTG TCGGGCGGAT CGCGCCAGAC CCTTTATACG
CTTTTCGGCG ACAAGCAGGG CCTGTTCGAG GCTCTCGTCA CGGGAACCTG CCAATCGATC
TTTCACGGCA TGACGCCGGA AAAACTGGCG CCGCAGGAGC CGGAGGCGGC CTTAACCGGA
TTTGGCGCCC GCTATCTTGG CATCATTACC TCTCCCGCGG CTCTGAGCCT CAATCGTCTC
ATGGTCGCCG AGGCGCCCCG CATTCCCGAC ATCGCGGAAC GCTATTGGAC GCTTGGCCCG
GGACGCAGCC GCGCATTTCT CGCCGAATTC TTCAGGCGCC AGGGGAGCGC CGGCAAGCTC
CGGATCGACG ACGCCGAAAC GGCGGCCGAC CATTTCCTCG AAATGCTCTC CGGCACGATC
CGGTTCAAAT GCCTGATCGG CGTGCGCAAG CCTCCGGACG CCGCGGAAAT CGAGGCGATC
GTAGCCAAGG CGGTCCGCCA ATTTCTCGAA GGCGCGGAGC CTCGCCGCGT GGTCGCTGGG
CAAGCGATCC GCCAGCCTTG CGCCGTTCCG GGCGGCTCGG CGGCGAGAGA CTGA
|
|---|
| Protein sequence | MTDQTDKFEP PAPAPSKRLA ARRQAFLEAA RVVFEDKGFA AATIDEVIAL SGGSRQTLYT
LFGDKQGLFE ALVTGTCQSI FHGMTPEKLA PQEPEAALTG FGARYLGIIT SPAALSLNRL
MVAEAPRIPD IAERYWTLGP GRSRAFLAEF FRRQGSAGKL RIDDAETAAD HFLEMLSGTI
RFKCLIGVRK PPDAAEIEAI VAKAVRQFLE GAEPRRVVAG QAIRQPCAVP GGSAARD
|
|---|
| |