Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2440 |
Symbol | |
ID | 7093992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 2659206 |
End bp | 2660735 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643465761 |
Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
Protein accession | YP_002362731 |
Protein GI | 217978584 |
COG category | [M] Cell wall/membrane/envelope biogenesis [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.00769093 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTATGG CGGAGATGCA GCCGGCGCAG CTGTTCTCTC TCATCGCCGA GCATTCCGAT ATCGCCGTCA TGGCGGCGGC TCTCGGTCTC GGCTGCATTT CCCTCGCAAT CCTCGCCCTC CGTCGGGACG CCATGTGGCG GCTCGCTGGC AGGATCGGCT CCTTTGTCGC CTTGACGGCC GCGCTCGCCA GTCAAGGCAT TCAGCCCTAT CAGCCGCGCC ATGACGCCGA GCAAAGCTCG GCGCATCAGA TCGGGCTCTA TTTCATCGAA GTTTTGTGGT GGATTGCGCT CGCGCGCAGT CTTGTCGGCA TCGTCGACGC CTTTGTCATC TTCGAGCGCA AGCCGCAGGA AAGCCGGCTG TTTCAGCAGC TGATCGCCGG GCTGATCTAT CTCGGCGTCG CCTTCGCCAT TGTCGGCCAG GTCTTCGAGG TTCCGGTCGG GGCGCTGTTT GCGACCTCCG GCGCGGTCGC CATCATCGCC GGCCTCGCGC TGCAAAGCAC GCTTGCCGAT GTTTTCTCAG GGATCGCGAT CAGCCTCGGC CGATCTTACC GCATCGGCGA CTGGATCGTC GTCGATAGCG CCGTCGAGGG ACGCATCGTC GAGACGAACT GGCAGAACGT GCATCTTTTG ACGTCGACGC ATGATCTGGC GATCATCCCG AACAGCGTCG TCGCCAAGGC GAGGCTGCTC AACCAGAGCT GGCCCGATTC GGCGCGCGAC GCGCGGGTGC TGGTGCGGCT GAGGCCCGCC CTCTCGCCCG CCGCCGTCGT CGAACTGGGG CTTGAGGCGA TGGCCAGTTG CAATCTGATC CTGCATGATC CGCCGGCGAC CGCCACGGTC AAATCGCTCA ACGGATCGGC AATCGAGGTC GAACTGAAAT GCCGAGTGCA TGACCGCACG CTCGTCGATG GCGCCACCAA TGAGGTGTTT GACCGTTTCT TTCGCCACGC CGTTGCGGCC GGCCTCAGCT TTGCGCCGGA CGCCGGCGAT TCTTACGCTC CGGACATCGA ATTCGAGACG GCTGCGGCCG CCGCGGGCAG GATCACGATG CGCCTGCCTT TGTTCGCCTC CCTCGCAAAA GAGGACAGGG CTGCGCTCGC GGCGAAGATG AAGCGCAAGG AATATGCGTC GGGCGAAGTC GTCATCGGGC CGGGCGAGCT GGCGCAATCC CTTGGCATCG TGCAGGCCGG CGCCCTTGCG CTCTATCACG CCCGCGACGA TCGCGAGCTG ACGCGGCTGG CTCCCGGCGA TTATTTCGGC GAGGGCGGCC TGCTGCTCGG CGAGCCGCAG CAAAATGCGT TGCGCGCCGT GACCCGCGCC GTCGTCTATG AGATCGGCGC TGCGGACCTT GCTCCCGTGC TGCGTTCGCG GCCCGGCCTG TCGCATCAGC TCGGCGAGGC GCTGGCGCAG CGGCGGGCGA TGGAGCAGAA AAACGAAGTG GACGTCAAAC ACCATACCGG TCACACGGCC AAGCGCTTCG CCGATCGCAT CATGGAGCTG TTCCAGCTCG ATCTGACCTC TGCGCGCTGA
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Protein sequence | MTMAEMQPAQ LFSLIAEHSD IAVMAAALGL GCISLAILAL RRDAMWRLAG RIGSFVALTA ALASQGIQPY QPRHDAEQSS AHQIGLYFIE VLWWIALARS LVGIVDAFVI FERKPQESRL FQQLIAGLIY LGVAFAIVGQ VFEVPVGALF ATSGAVAIIA GLALQSTLAD VFSGIAISLG RSYRIGDWIV VDSAVEGRIV ETNWQNVHLL TSTHDLAIIP NSVVAKARLL NQSWPDSARD ARVLVRLRPA LSPAAVVELG LEAMASCNLI LHDPPATATV KSLNGSAIEV ELKCRVHDRT LVDGATNEVF DRFFRHAVAA GLSFAPDAGD SYAPDIEFET AAAAAGRITM RLPLFASLAK EDRAALAAKM KRKEYASGEV VIGPGELAQS LGIVQAGALA LYHARDDREL TRLAPGDYFG EGGLLLGEPQ QNALRAVTRA VVYEIGAADL APVLRSRPGL SHQLGEALAQ RRAMEQKNEV DVKHHTGHTA KRFADRIMEL FQLDLTSAR
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