Gene Msil_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2420 
Symbol 
ID7093972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2639216 
End bp2640169 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID643465742 
ProductAuxin Efflux Carrier 
Protein accessionYP_002362712 
Protein GI217978565 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.267139 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG CCTTCGGCGC CGTCATTCCG ATCTTCGCCC TGATCGTCGC GGGCGTCGCC 
ATCCGGCGCT GGGAGATTTT GGGTCCCGGC GCCTCGCGCG AGCTGAACCG CTTCGTCGTC
TTTCTCGCGC TGCCGGCGCT GTTGTTCGAC ATCATGGCGC ACGCCAGCTG GTCGTCGATC
TGGCAGCCGG GTTTTATCGG CGCCTTCGGG CTCAGCTCAG CGATCGTCTT CGCGCTTGCC
GTCGCGGTCC GCCTCGCCGC TGGACGACCG CTGGCCGACG CCGGCGTCGA CGGCCTCAAC
GCCGCCTATG GCAACACCGG CTATATCGGC ATCCCGCTGT GCCTCGTCGC GCTCGGCCCG
GCGAGCCAGA CGGGCGCCGT GATCGCGACG ATCTTCACCG CCTGCGTTCT GTTTGGCGGC
GCGATCGTTC TGATCGAGAT CGGGCTGCAG GCGGAAAAGC GGATCGCCCC GCTGATTTTC
AAGGTGGCGA AATCGCTGCT GCGCAATCCG CTGGTGGCGG CGCCCGCTGC TGGCGCGCTC
ATCAATGCGC TGGGGTTCAA AATCCCCGAT CAGGCCGAGG TCTTCTTCAA GCTGCTCGGC
TCCGCCGCCT CTCCCTGCGC TCTCGTCGCG CTCGGCCTGT TCTTCGCCGG CGGGCGCGAT
CGGGCGGAGG AGGCGGCGCC AAAGCGGGAG GCGGCTGCCG CCGCTTTTCT GATCGGTCTA
AAACTCATCG CGCAGCCGCT GATCGCCTTT CTGCTCGTCG AGAAAATCTT CGCGCTGGAG
CCGGTCGCGG CGAAAACGGC GGTGGTCATG GCCGCGCTGC CGACGGGCAC GGGCTCCTTC
ATGCTCGCCG AATATTACCG GCTGGACGCA GGCCTGACGT CCAAGGTCAT TTTGATCTCG
ACGGCGCTCT CAGCCGTCAC GATCGCGGCC TATCTCGGCT TTGCAGGCCG CTAG
 
Protein sequence
MLSAFGAVIP IFALIVAGVA IRRWEILGPG ASRELNRFVV FLALPALLFD IMAHASWSSI 
WQPGFIGAFG LSSAIVFALA VAVRLAAGRP LADAGVDGLN AAYGNTGYIG IPLCLVALGP
ASQTGAVIAT IFTACVLFGG AIVLIEIGLQ AEKRIAPLIF KVAKSLLRNP LVAAPAAGAL
INALGFKIPD QAEVFFKLLG SAASPCALVA LGLFFAGGRD RAEEAAPKRE AAAAAFLIGL
KLIAQPLIAF LLVEKIFALE PVAAKTAVVM AALPTGTGSF MLAEYYRLDA GLTSKVILIS
TALSAVTIAA YLGFAGR