Gene Msil_2418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2418 
Symbol 
ID7093970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2636795 
End bp2638033 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content67% 
IMG OID643465740 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002362710 
Protein GI217978563 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.269173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA GGACGCCCGA CGCAATCGCG GCCCCAGCGA CGCCCCTGCT GCGCCAGCGC 
AGCGTGCAGC TGTTCGTCGG CGCGCGCATG GCGATGGCCT TCTCCATGCA GATGCAGCAT
GTCGCCATCG CCTGGTCCGT CTATGCGCTG ACCGGCGATC CGTTGAGCCT CGGCCTGATC
GGCCTTGTCG AATTTCTTCC GTCCGTGCTG TTCATCCTCG TGACCGGCGG CGTCGCCGAC
CGGCTCGATC GCCGCAAGGT TGGCGTCGTC AGCGCTGCGG CGCAGGCCTT CGCGTCGGTT
TGTCTCCTTT ATGCGGCGGC CAGCGCCTCG CCGAACCTCG CGCTCATTTA CGCCATCGTA
TTTTTTCTCG GGACGGCGCG CTCCTTCGCC CAGCCGGCGC TCGCGGCGCT GCTGCCCGGT
ATCGTCGAAG TTGCGGATTT TCCCCGCGCG GTGGCGATGA CGACCTCCTC GCTGCAGGTC
GCAATGATCG CCGGCCCGGC GGCGGGCGGT CTTCTGATGG CCTGGAGCGC TCCGGCGCTG
TTTGCGCTGG CGGCGGCGCT CAACGCCGCG GCGGCGCTTA TGATTGCCTT CATCAAAGCG
CGGCAGGGCC GCGGCGAAGC GGAGAAAGAA ACCGGCTTCA AAAGCCTGCT CGCCGGCTTT
TCCTATGTTC GCGCCAACCG CCTCCTGCTC GGCGTCATCT CGCTCGATCT GTTCGCCGTG
CTGTTTGGCG GCGTCACCGC CCTCTTGCCG ATTTACGCCC GCGACATTCT CGACGCCGGC
CCGGTCGGGC TCGGATTGCT GCGCAGCGGC CCGGCGATGG GCGCGATTGT CGTCGGCCTC
ATCCTCGCCC GCTTCCCGCT GCGCCGGAAC GTCGGCGCGA TCATGCTCGC ATCGGTCGCC
GCCTTTGGCG CGGCGACGAT CCTTTTTGCG CTTTCGACGA AGATGCCGCT TTCCGTCGCC
GCAATGATCG CCCTTGGCGG CTTCGACATG GTCAGCATGG TCATCCGCTT CACCATGGTG
CAGCTCGGCA CGCCGGATGC GATGCGCGGG CGGGTCAACG CCATCAATTA TGTCTTCATC
GGCGCCTCGA ACCAGCTCGG CGACTTCGAA TCGAGCGTCG TCGCCTCTTT CGCGGGGGCA
AAGGGCGCGG CCGTGATCGG CGGCGTCGGA ACGCTTCTCG TCGTCGCGCT CTGGGCCTGG
CGATTCCCCG AGCTGCGCCG CGCCGACCGG CTTGAATGA
 
Protein sequence
MDDRTPDAIA APATPLLRQR SVQLFVGARM AMAFSMQMQH VAIAWSVYAL TGDPLSLGLI 
GLVEFLPSVL FILVTGGVAD RLDRRKVGVV SAAAQAFASV CLLYAAASAS PNLALIYAIV
FFLGTARSFA QPALAALLPG IVEVADFPRA VAMTTSSLQV AMIAGPAAGG LLMAWSAPAL
FALAAALNAA AALMIAFIKA RQGRGEAEKE TGFKSLLAGF SYVRANRLLL GVISLDLFAV
LFGGVTALLP IYARDILDAG PVGLGLLRSG PAMGAIVVGL ILARFPLRRN VGAIMLASVA
AFGAATILFA LSTKMPLSVA AMIALGGFDM VSMVIRFTMV QLGTPDAMRG RVNAINYVFI
GASNQLGDFE SSVVASFAGA KGAAVIGGVG TLLVVALWAW RFPELRRADR LE