| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2354 |
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| Symbol | |
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| ID | 7090338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2561846 |
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| End bp | 2563186 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643465676 |
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| Product | type VI secretion protein, VC_A0114 family |
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| Protein accession | YP_002362646 |
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| Protein GI | 217978499 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.401785 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCCT GGTACAGTAA AGTCCTTTGG TCGGAAGGAC TTTTCCTTCG CCCCCACCAC
CTTCAGCAGG CCGACCGTTA CCTCGAACAT CTGATCGAGG CGCGAACGCG CAGCGCCACC
CCCTATCCCT GGGGTTTTTC GCATCTTGAG ATCGACCGCG ACCTTGCGCA GCAGAGCAAA
TTCGCGGTGC GCCGCGCGGC GGGGGTGATG CCGGACGGAA CGCCCTTCGA CATTCCCAAC
GACAGCCCGG CGCCGCCGCC GCTCGAAGTG CCGGATGGCG CGGCGCAACA ACTGCTCTGG
CTGTCGATGC CGACCGCTTC ATCAAATACG CGCGAGGTCG ATTCGGCCGA TTCGTCGAGC
GCCAGCCGCT TCGTCATCGG CGCCGAGACC TTTATCGATT CGACCTCCTC GCTGCGCATC
GAGGAGGAGA TCGACGTCGC CTATCCGCGC CTCGCCTTCG ATCTGCGCAA GACGGCCAAG
CCCGGCTTTC AGGGGCTCCC CATCGCCCGC ATCGTCGAGG TGCGCGATAA ATCGATCGTT
TTCGACGAGA AATTCGCCCC GACCGTTCTG GTCTGCTCGG CTCATCCGAC CGTCGAGGGC
TGGCTCGACC GGGTGATCGG CTGGATCGAC GCAAAGCTCG GCGAACTCGC CCGCTATGCT
GCGGACCCGA CCGCGGGCGG CGGACTGCAA AGCGTCGATT ATCTGGTGCT GCAAGTCCTG
AACCGCCACA TCACGGTGAT GCAGCATCTG CGCGGATCGC GCTATGTCCA TCCCGAACGG
CTCTATGTCG AGCTGATCCG GCTCGCCGGG GAACTTGCGA CCTTCGCCAC CACCGAGCGC
CGCGCGAGGC TCTATCCGCT CTACGACCAT GACAATCTGG AGGCGAGCTT CGCGCCCGTC
CTGCGCGATC TGCAGGATTT CCTTTCGGCG CGGCTGGGGC GGCGGGCGAT CCGCCTCGAC
ATCATCGCGA GGGCGGAGAA CGCCTTCATC TCGCCGATCC GCGACCGCAG CCTGTTCCGC
AACGCAAGCC TCGTCCTCGA AGTGGCGGCG CGCCGGCCGC TGACCGAGAT TCAGTCGAGC
TTCCCGCATC TGTTCAAGGT CGGCCCCGGC TCCAAGATGA ACGAAATCGT GCACGCCCAT
CTGCCCGGCG TGCCGCTGGT GCATCTGCCG ACGCCGCCGC CGCAGATCCG CGCCATCACC
GACCATGTCT ATTTCTATCT CGACCGCACC TCGCCGCTAT GGCCGGAATT CTCGACGGCG
AGTTCGATCG GCATGCATTT CTCCGGCGAT TGGCCCGAGC TCAGCCTCGA GCTCTGGGCC
GTCCTGGAAG ACCGGTCATG A
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| Protein sequence | MMSWYSKVLW SEGLFLRPHH LQQADRYLEH LIEARTRSAT PYPWGFSHLE IDRDLAQQSK
FAVRRAAGVM PDGTPFDIPN DSPAPPPLEV PDGAAQQLLW LSMPTASSNT REVDSADSSS
ASRFVIGAET FIDSTSSLRI EEEIDVAYPR LAFDLRKTAK PGFQGLPIAR IVEVRDKSIV
FDEKFAPTVL VCSAHPTVEG WLDRVIGWID AKLGELARYA ADPTAGGGLQ SVDYLVLQVL
NRHITVMQHL RGSRYVHPER LYVELIRLAG ELATFATTER RARLYPLYDH DNLEASFAPV
LRDLQDFLSA RLGRRAIRLD IIARAENAFI SPIRDRSLFR NASLVLEVAA RRPLTEIQSS
FPHLFKVGPG SKMNEIVHAH LPGVPLVHLP TPPPQIRAIT DHVYFYLDRT SPLWPEFSTA
SSIGMHFSGD WPELSLELWA VLEDRS
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