Gene Msil_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2218 
Symbol 
ID7091340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2398395 
End bp2399612 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content65% 
IMG OID643465539 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002362514 
Protein GI217978367 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.464422 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCGCGA TTCTTCAAAA TCTGATTCAT GTGACCGACG CGGCCGCGGC GAAAGCCGGC 
TTCGTCGACG CGCGGGCGCG CCGCGAATAT GTCCAGCTCG CCGGCGCCGC CTTTCTGATT
TCCTTCATGT ATTCGCACGC CGCGCTGCTC GCGGTGGTTT TCGCGCGTGA AGGGTTTGAT
CTTCATGCCA TCGGCCTGCT GCTGTCGCTC TACGCCGCCC CGGTCATCCT GTTCACCTTT
CTGTCGGGGG CGATCGCCGC GCGGATCGGC GTGCTCAATA CGTGCCGGCT CGCAATTCTG
CTGATGCTGA TCGGCTTTTT CAGCCTGCGC TACACCGCTG GCGCCTTCTG GCCGGCGATG
GCCTCGCGCA TGGCGCAGGG GATCGGACAG GGGCTGCTGC TCAGTTCCTT CGTCACCTAT
GGGCAGAGCC GCCTCAACGC GAGCCGGTTC GTTTATCTGA TCGCCCTGTT CACCAGCATG
TTCGCCGTGG CGCAGGCGTT CGCGCCGCCG TTCGGGGCGA TGATCCTCAA CGCCTATGGC
GCGCCGGCGA TGTTTCTGGA GGGCTCGATT CCCGCCGTTC TTGCCCTCGT TCTGACCTTT
GGGCTGCGGC CAATCCCGCG CCCCGCGCCC GGCCGCGGGC TCGATCTTTC TGCGGCGTGG
CGGCGCGAAA ACATCGGCTC GTTCGCCGCC GTCTTCGTCA ATGGGGCGAT GTTCGGCTTT
ACCGCCGCCT ATCTCGCCGC GCTGCTCGAG GCCGAGGCGC TGCCGATCGG TGCGTTCTTC
CTCGCCTCGA CGACCACCTT GTTCGCGAGC CGCTTTCTCG CCATGGGGAT TTTCGAGACG
ATCGAGCGCC GGCTGCTGGT CGCGGGCGGA TTTCTGTCGC AGGCTGCGAG CTTCGTGCTG
ATCGGGTTGG CCGGCCAGTC CTGGCTGATC GTCATCGCCG GCATTCTGTT CGGCGCGGGC
TATAGCGTCG TCTATCCGGT GCTGTCGGCG GCGATCAGCA AACATCTCGA CCCGTCCGAG
CGCGCCGGGC CGCAGGCGCT GCTGAATACG GCGTTCAACA TCGGGATTTT CCTGATGCCG
TACCCGCAGG CGCTGATCAT CGCCCATCTC GGTTTCCGGG CGGCGGCGCT GGTGCTGGCC
GGGCTGGCAT TCGTTTCGGC TTTGGCGTTG ATTGCAACGG CGCTTTTGCA CCAGGCGCTT
CGCTCATCCC GCCCCTAA
 
Protein sequence
MRAILQNLIH VTDAAAAKAG FVDARARREY VQLAGAAFLI SFMYSHAALL AVVFAREGFD 
LHAIGLLLSL YAAPVILFTF LSGAIAARIG VLNTCRLAIL LMLIGFFSLR YTAGAFWPAM
ASRMAQGIGQ GLLLSSFVTY GQSRLNASRF VYLIALFTSM FAVAQAFAPP FGAMILNAYG
APAMFLEGSI PAVLALVLTF GLRPIPRPAP GRGLDLSAAW RRENIGSFAA VFVNGAMFGF
TAAYLAALLE AEALPIGAFF LASTTTLFAS RFLAMGIFET IERRLLVAGG FLSQAASFVL
IGLAGQSWLI VIAGILFGAG YSVVYPVLSA AISKHLDPSE RAGPQALLNT AFNIGIFLMP
YPQALIIAHL GFRAAALVLA GLAFVSALAL IATALLHQAL RSSRP