| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2179 |
|---|
| Symbol | |
|---|
| ID | 7093400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2351061 |
|---|
| End bp | 2352182 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643465503 |
|---|
| Product | phage major capsid protein, HK97 family |
|---|
| Protein accession | YP_002362479 |
|---|
| Protein GI | 217978332 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4653] Predicted phage phi-C31 gp36 major capsid-like protein |
|---|
| TIGRFAM ID | [TIGR01554] phage major capsid protein, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGCGC CCGGCGCTCA ATTCACACAA AAGACGGCCG ATTCGGCCGA CGCGATCTTC
GCGGCGATCG ATCGCCTCGA CGGCGACGCT GAGGCCAAGC GCGCCCATGA CGAGATACGC
GCGGCGCGAT CGGCCTTCGT GAAGGCGCTT CGCCTCGGCC ACAAGGCGCT CTCGGCGCAG
GAGGCGCGGC ATTTGGGCGA CGCGCAACAA GCGCGCGTTC TCAACATCGC GGAAGCCACG
CCCCTCGCCG GCGGCTATCT CCTGCCGGCG CCCGTCGCCG CGAGTCTTCT GCGGCGCGTC
GAACTCTACA CCCCTGTTGC GTCGGTGGCG CGCGTCATCA CGACCGATAC CGGCGGTCCG
CTTTCCTGGC CCTTGGTCGA CGAGGCTTCT ATGGGCGCAG GCATTGTCGC CGAGAACAGC
ACGCTCAATG CGGTGGATAT GCCAGTCGGA ACGCTTGGGC TGAACGCCAG TAAATTCTCG
TCGGGAATCA TTCCTGTTTC GCTGGAGGTC TTGCAGGACA GCGCCGTAAA CATCGAGGAT
ATGCTGCTCG ATTTGTTGGC TGCGCGCCTT GCGCGAGGCA TGAACAGTTT CTTTACTAGC
GGAACGGGCG TAAACCAGCC GCAGGGCGCG CTGACCGGCG CCAGCCTTGG CGTAACGCTC
CCGGCGGCCA ACACAACGTC GCTGACCTCG GACGGCTTGA TCGCGCTCTA TTCGAGCGTC
GACGCCGCCT ATCGCCAGAG CTTGCGTTGC GTTTGGATGA TGAACGATAT GACATTGCTG
GCGGTGCAGA AGATCGCCGC GGCGCAAGGC TGGCCGCTAT GGTTTCCCGA TCCGCTTCTC
CAACCCGGCG GACCGCCGCC GCAGGGGCGA CTGTTCGGCC GTCCCGTCGT CATCAACAAT
GATATGCCGG CGATGGCGGC GAGCGCCAAG CCGATTCTGT TCGGCGATTT TGCCTCTTTC
GTGGCGCGCT TCGTCAACGG CGCCGCGATC CTACGGATGA ATGATTCCGG CTATCTTTCG
AAAGGCCAGA CGGCCTTCGT CGCGTTCGCA CGAGCGGACA GCCGGGTCGC CAACTGGAGC
GCGGGAGCCG CGCTGAGATA TCTCCAGAAC AGCGCAAGCT GA
|
|---|
| Protein sequence | MLAPGAQFTQ KTADSADAIF AAIDRLDGDA EAKRAHDEIR AARSAFVKAL RLGHKALSAQ
EARHLGDAQQ ARVLNIAEAT PLAGGYLLPA PVAASLLRRV ELYTPVASVA RVITTDTGGP
LSWPLVDEAS MGAGIVAENS TLNAVDMPVG TLGLNASKFS SGIIPVSLEV LQDSAVNIED
MLLDLLAARL ARGMNSFFTS GTGVNQPQGA LTGASLGVTL PAANTTSLTS DGLIALYSSV
DAAYRQSLRC VWMMNDMTLL AVQKIAAAQG WPLWFPDPLL QPGGPPPQGR LFGRPVVINN
DMPAMAASAK PILFGDFASF VARFVNGAAI LRMNDSGYLS KGQTAFVAFA RADSRVANWS
AGAALRYLQN SAS
|
|---|
| |