Gene Msil_2149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2149 
Symbol 
ID7093370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2322439 
End bp2323584 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID643465474 
ProductPHB de-polymerase domain protein 
Protein accessionYP_002362450 
Protein GI217978303 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAAAA ATCTGCCCAT AGAGGCGACC GCTAATTTCG AGAACAGCGT GCCCTTCTTC 
TGGCTGCTCG CGCCCTGGGC GAAGTTTGGC GAAGAAGCGG CCGAGACATT CCAGAGAAAT
ATCGATTTTG CCAAAGAGGA AACCAAAGAG GAGTTCGAAC TCAAGCCCGT CTGGGCGACC
GCGAACGAGA TCGTTTATGA GCTCAACACC ATGTGGCTTC GCGATTTTTC CGATGCGGCC
GCGCGCGGCG ACTCCAGCAT TATCCCGACC CTCATCGACC CGCCCTATGC CGGACACCAT
TCGACCATCG CCGACTACGC CGAAGGCCAG AGCCTCGTCG AGACGCTGCA GGCGAGCGGC
CTAAGGCGCC TGCTGTGCAT CGACTGGAAG TCGGCGAGCG CAGAAATGAA GGACTACAAC
ATCGACATCT ACCTCGCCGA GATCAACGCC GTCGTGGACG ACCTCGGCGG CCGGGTCAAT
CTCATCGGGC TATGCCAGGG CGGCTGGATG GCGGCGATGT TCGCGGCCCG CTACCCGTAC
AAGGTCGCGA CGCTGACGGT CGCTGGCGCC CCGCTCGATT GCGACGCGGG GGACGGATTC
GTCAAGAAGA TCGCCAAGGA GCAGCCGATG GCCTTCTTTG AAGAGCTGGT CAACGCGGGC
GGCGGCCGGA TGCGCGGCAA ATTTATGCTC GCCGGCTGGA AAAGCATGCA TCCCGAAGAG
CATTACTTCA AAACCCACGT CGATCTTTAC GAGAATGTCG AAGACCCCGC CTTCGTCAAG
AAACGCGAGG AATTCGAGAG ATGGTATGAG AATCCGCTCG ACCTGCCAGG CCGGTGGTAC
CTGCAGGCGA TCCGGCTTCT GTTCAAGGAC AACGCGTTCT TCAAGGGCGA CTTCGTCGCG
CTCGGGCGCA AGATCGCGCT GAAGGACATC ATTTGTCCGA CGTTCCTGCT GGCCGGCGAG
GGCGACGATA TTACGCCTTC TCCGCAGGTC TTCTCCGCCG AGGAAAAGCT TGGGACGCCA
AAGGACAAAA TCGTCAAGAA GCTGGTTCCG GGCGGGCATA TCGGCTTGTT CATGGGCTCC
AAGACGCTCA AGAATTTCTG GCCGGACATC GCCGCCTGGA TCAAGCGCGA ATGTCCGGAC
GCGTGA
 
Protein sequence
MTKNLPIEAT ANFENSVPFF WLLAPWAKFG EEAAETFQRN IDFAKEETKE EFELKPVWAT 
ANEIVYELNT MWLRDFSDAA ARGDSSIIPT LIDPPYAGHH STIADYAEGQ SLVETLQASG
LRRLLCIDWK SASAEMKDYN IDIYLAEINA VVDDLGGRVN LIGLCQGGWM AAMFAARYPY
KVATLTVAGA PLDCDAGDGF VKKIAKEQPM AFFEELVNAG GGRMRGKFML AGWKSMHPEE
HYFKTHVDLY ENVEDPAFVK KREEFERWYE NPLDLPGRWY LQAIRLLFKD NAFFKGDFVA
LGRKIALKDI ICPTFLLAGE GDDITPSPQV FSAEEKLGTP KDKIVKKLVP GGHIGLFMGS
KTLKNFWPDI AAWIKRECPD A