Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_2149 |
Symbol | |
ID | 7093370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | + |
Start bp | 2322439 |
End bp | 2323584 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643465474 |
Product | PHB de-polymerase domain protein |
Protein accession | YP_002362450 |
Protein GI | 217978303 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGACGAAAA ATCTGCCCAT AGAGGCGACC GCTAATTTCG AGAACAGCGT GCCCTTCTTC TGGCTGCTCG CGCCCTGGGC GAAGTTTGGC GAAGAAGCGG CCGAGACATT CCAGAGAAAT ATCGATTTTG CCAAAGAGGA AACCAAAGAG GAGTTCGAAC TCAAGCCCGT CTGGGCGACC GCGAACGAGA TCGTTTATGA GCTCAACACC ATGTGGCTTC GCGATTTTTC CGATGCGGCC GCGCGCGGCG ACTCCAGCAT TATCCCGACC CTCATCGACC CGCCCTATGC CGGACACCAT TCGACCATCG CCGACTACGC CGAAGGCCAG AGCCTCGTCG AGACGCTGCA GGCGAGCGGC CTAAGGCGCC TGCTGTGCAT CGACTGGAAG TCGGCGAGCG CAGAAATGAA GGACTACAAC ATCGACATCT ACCTCGCCGA GATCAACGCC GTCGTGGACG ACCTCGGCGG CCGGGTCAAT CTCATCGGGC TATGCCAGGG CGGCTGGATG GCGGCGATGT TCGCGGCCCG CTACCCGTAC AAGGTCGCGA CGCTGACGGT CGCTGGCGCC CCGCTCGATT GCGACGCGGG GGACGGATTC GTCAAGAAGA TCGCCAAGGA GCAGCCGATG GCCTTCTTTG AAGAGCTGGT CAACGCGGGC GGCGGCCGGA TGCGCGGCAA ATTTATGCTC GCCGGCTGGA AAAGCATGCA TCCCGAAGAG CATTACTTCA AAACCCACGT CGATCTTTAC GAGAATGTCG AAGACCCCGC CTTCGTCAAG AAACGCGAGG AATTCGAGAG ATGGTATGAG AATCCGCTCG ACCTGCCAGG CCGGTGGTAC CTGCAGGCGA TCCGGCTTCT GTTCAAGGAC AACGCGTTCT TCAAGGGCGA CTTCGTCGCG CTCGGGCGCA AGATCGCGCT GAAGGACATC ATTTGTCCGA CGTTCCTGCT GGCCGGCGAG GGCGACGATA TTACGCCTTC TCCGCAGGTC TTCTCCGCCG AGGAAAAGCT TGGGACGCCA AAGGACAAAA TCGTCAAGAA GCTGGTTCCG GGCGGGCATA TCGGCTTGTT CATGGGCTCC AAGACGCTCA AGAATTTCTG GCCGGACATC GCCGCCTGGA TCAAGCGCGA ATGTCCGGAC GCGTGA
|
Protein sequence | MTKNLPIEAT ANFENSVPFF WLLAPWAKFG EEAAETFQRN IDFAKEETKE EFELKPVWAT ANEIVYELNT MWLRDFSDAA ARGDSSIIPT LIDPPYAGHH STIADYAEGQ SLVETLQASG LRRLLCIDWK SASAEMKDYN IDIYLAEINA VVDDLGGRVN LIGLCQGGWM AAMFAARYPY KVATLTVAGA PLDCDAGDGF VKKIAKEQPM AFFEELVNAG GGRMRGKFML AGWKSMHPEE HYFKTHVDLY ENVEDPAFVK KREEFERWYE NPLDLPGRWY LQAIRLLFKD NAFFKGDFVA LGRKIALKDI ICPTFLLAGE GDDITPSPQV FSAEEKLGTP KDKIVKKLVP GGHIGLFMGS KTLKNFWPDI AAWIKRECPD A
|
| |