| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2129 |
|---|
| Symbol | |
|---|
| ID | 7091496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2304488 |
|---|
| End bp | 2305555 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643465454 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002362430 |
|---|
| Protein GI | 217978283 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.461337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGA CCGCCCTTAT CGCCGGCGTG AGCGGCATCG TCGGCGCCGC CGCCGCAACC
CTCTTCGTGG AGAACGGCTG GGAAGTGTTC GGGCTCGCGC GCAAACCATT GGCGCAAAAA
GGCGTCACGC CGATCGCCTC CGATCTGCAG GAGCCGGCCT CCCTTTCCCC GGCGCTGGCC
GGGATCCGCC CGAGCCATGT TTTTCTGACC AATTGGTCGC GGCAGGCGAC CGAGGCCGAA
AATATCAAGG TCAATCGCGC CATGGCGCGC AATCTGCTCG ACGCCCTGCG CCCGGCCGGA
AGCGTCCGCC ACGTTGCTCT CGTGACGGGC CTGAAACACT ATCTTGGACC GTTCGAGGCC
TATGGGAAGG GAACGCTGCC GGCGACCCCT TTTCGCGAGG AGCAGCCACG GCTCGACGTC
GAGAATTTTT ATTACGCGCA GGAGGATGAA GTCTTCGCCG CCGCCGCCCG CGACGGATTC
GGGTGGAGCG TGCATCGGCC GCATACGATC ATCGGCAAGG CCGTCGGCAA TGCGATGAAT
ATGGGAACAA CTCTGGCGGT CTATGCCGTC ATCTGCCGGG AGACGGGAAG GCCGTTCCGT
TTTCCAGGTT CGGCCGCCCA ATGGAATGGC CTGTCCGATA TGACGGATTC GCGCCTGCTC
GCGCGTCATC TGCTCTGGGC GGCGACGACT CCGTCGGCGG CGAACCAAGC GTTTAATGTC
GTCAATGGCG ATATTTTTCG CTGGAGCTGG ATGTGGAGCC GCATCGCCGA CTGGTTCGGG
ATCGAGGCGG CGCCCTTCGA TGGGCGGGTC GAGCCGTTGG AAAAGCAGAT GGCCAACGAC
GCGCCCGTTT GGCGCGCGAT CGCGGAGCGC TATGGCCTGG GCGAGCCGGA CATCGCGCGG
CTGGCGTCGC CGTGGCATAC GGACGCCGAT CTCGGACGGC CGATTGAGGT CGTTACCGAC
ATGTCGAAAA GCCGGAAGCT CGGCTTTACC GCCTACCAGC CGACTGACGA CGCCTTCTTC
GATTTGTTTG CGGAGCTGCG CGCGGACAGG CTTATCCCGC CGGCTTGA
|
|---|
| Protein sequence | MTKTALIAGV SGIVGAAAAT LFVENGWEVF GLARKPLAQK GVTPIASDLQ EPASLSPALA
GIRPSHVFLT NWSRQATEAE NIKVNRAMAR NLLDALRPAG SVRHVALVTG LKHYLGPFEA
YGKGTLPATP FREEQPRLDV ENFYYAQEDE VFAAAARDGF GWSVHRPHTI IGKAVGNAMN
MGTTLAVYAV ICRETGRPFR FPGSAAQWNG LSDMTDSRLL ARHLLWAATT PSAANQAFNV
VNGDIFRWSW MWSRIADWFG IEAAPFDGRV EPLEKQMAND APVWRAIAER YGLGEPDIAR
LASPWHTDAD LGRPIEVVTD MSKSRKLGFT AYQPTDDAFF DLFAELRADR LIPPA
|
|---|
| |