| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2108 |
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| Symbol | |
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| ID | 7091474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2281600 |
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| End bp | 2282712 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643465432 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002362409 |
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| Protein GI | 217978262 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG TCGATGCGGA CGAGCGCTTC ATGGCCGCCG CCATCGCGCT GGCGCGGCGC
GGCCTCGGAG TCTGCGCGCC CAATCCCGCT GTCGGCGCGC TGATCGTCAA GGACGGCGTC
GTCCTCGCGC GCGGCTGGAC TCAGGCGGGC GGCCGTCCTC ACGCCGAAGC CGAGGCTCTG
CGGCAGGCGG GCGATAAAAG CCGCGGCTCC ACTCTCTATG TCACGCTGGA GCCTTGCAGC
CATCACGGCA AGACGCCGCC CTGCGCCGAG GCGGTAATCG CATCGGGGAT CGCCCGCGTG
GCGTCGGCGA TCGAAGACCC GGACCCACGC GTCGCCGGGC GTGGCCATGA GCTATTACGG
GCTGCCGGGC TCATCGTCCG GACGGGTGTT TGCGCGCAAG CGGCGCTTCG CGCCAATCTC
GGCCATGTGC TTCGCGTCAC GCAAAACCGG CCCCTGATCA CGCTCAAACT CGCCATGACC
GCGGATGGCT TCGTCGCGGG CGGCCCCAAC GAACCGCGTC TTTCGATCAC GGGAGAGGCG
GCGAACGGCG CCGTCCATCT GATGCGCGCG ATGTATGACG CGATCTTGAT CGGCGTCGGA
ACGGCGCTGG CCGACGATCC GCTGCTGACG GTGCGCCTGC CCGGCCTCGA GCAGCGCAGA
CCCCTTCGCA TCGTGCTCGA CAGCGCGCTT CGGATTTCAC CCGCCTCGCG TCTCGTGGCG
ACCGCCCGCA GCCATCCAAC CCTGATTATT GCCGGAGAGG CCGCGCCCGC GGCGAACGAA
GCCCGGCTTG TCGCCGAAAA CGTCGCGGTC GCGCGGGTCC CGACAGACGG CGGCGGCCGC
CTCGATCTGC GCGCGGCGCT GGGGCTTTTG GCGTCGCGCG GCCTGACGCG GATCTTTTGC
GAAGCCGGCC CGACGCTCGC CGAAGCGCTG CTGCGCGAAG ATGCCGCCGA CGATATCATT
ATGCTGACGA GCCAAAAGCG TCTTGCCCGC CCCGGCCTTT GCGGCTTTAC GGCCGAACGC
ATCAATGCGC TTGAGGACGG CTCGCGCTAT CGGCTGGTCG AACAACGCGC CATTGGAGAC
GATCTCCTGA CGCGGCGCGA AAGGATTTCT TAG
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| Protein sequence | MSQVDADERF MAAAIALARR GLGVCAPNPA VGALIVKDGV VLARGWTQAG GRPHAEAEAL
RQAGDKSRGS TLYVTLEPCS HHGKTPPCAE AVIASGIARV ASAIEDPDPR VAGRGHELLR
AAGLIVRTGV CAQAALRANL GHVLRVTQNR PLITLKLAMT ADGFVAGGPN EPRLSITGEA
ANGAVHLMRA MYDAILIGVG TALADDPLLT VRLPGLEQRR PLRIVLDSAL RISPASRLVA
TARSHPTLII AGEAAPAANE ARLVAENVAV ARVPTDGGGR LDLRAALGLL ASRGLTRIFC
EAGPTLAEAL LREDAADDII MLTSQKRLAR PGLCGFTAER INALEDGSRY RLVEQRAIGD
DLLTRRERIS
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