Gene Msil_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2093 
Symbol 
ID7091459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2266688 
End bp2267890 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content50% 
IMG OID643465417 
Productintegrase family protein 
Protein accessionYP_002362394 
Protein GI217978247 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAAGA ATTTGACCAT AAAGGGAATT GCAGCGCTAA AGCCCCAGGC GAAGAGATGC 
GAGGTGCCGG ATGGCCATAC GCGTGGCCTT TATTTCGTTG TTCAGCCAAG TGGCGCGAAA
TCGTGGGCAT ATCGCTTCAG CTTCGAGGGA AAGCCAAAAA AGCTTACGAT TGGTTCTTAT
CCTGCAATCG ATCTCTCGCG GGCCCGCTCC ATTGCCTTGG CCTCTGCCAC GAAGGTGGCG
AATGGACGTA ACCCTGCAGC CGAAAAGAAA GTGGAGAGAG AGAAGGCGCG AAAGCCCAGC
GACCTCGATT TGGTCGACGT TGTAGTTGCT CAGTTTGTCG TCAAACACGT CGAACCGAAA
ACTCGCCCTC AATCCGCTAA AGAGATGAAG CGCATCCTTA AGCGTGAAAT TTTATCGCGC
TGGAGCGGGA GGCGCCTTAC GGAAATCACC CGCAGTGACA TCCGCGATTT GCTTGAAGCG
ATTGCTGACC GAGCTCCAAT TATGGCTAAT CGAGTTTTCG AAGTGATTTC CAGCCTGATC
AACTGGTCCA TCAGTATGGA GATGCTTTCC GCCTCCCCAA TCGCGGGACT TAGAAAACCG
TCTCCCGCCA AACGACGAGA TCGAATTTTG TCAGAGAAGG AATTGACGGA TGTTTGGCAA
GCGAGTGAGC GAGCGGGGTG GCCGTACGGC TCCATGATCA AAGTGCTGAT CTTGTCCGGT
CAAAGGCGCT CGGAGGTCTC GGACATGACC TGGTCGGAGA TCGATTTCGA AGAACGTTCT
TGGACCCTGC CAGCGGTTCG GACGAAAAAC GGCAAGGGAC ACATCATTCC GTTAAGCCCA
ACGATTATTG ATGTCTTACT GACCCTTCCA CGGATAGGAA GCGAAAGTGG CTTTGTCTTC
ACCACTAACG GATTTTCCCC GATAAGGAAT TTTGCGAGAC GCAAGAAAGC GTTGATGATG
AGTTGTCAAT CCGAGAATAA CTGGACGCTT CATGACCTAC GACGCACCTT CGCGACGGGC
ATGGCCCGAT TAAAGGTAGA GCTTCCCGTC GTCGAAAAAC TGCTTAATCA TTCAAGCGGC
ACTTTTGGCG GAGTTCAGGG CGTTTATCAG CAATATGACT TTCAATCAGA AAAAAGGGAG
GCAATGAATC TTTGGGCATC GTATGTTAAT AAAATAACCA ACAAGTTAGA TACAATTAAA
TAA
 
Protein sequence
MAKNLTIKGI AALKPQAKRC EVPDGHTRGL YFVVQPSGAK SWAYRFSFEG KPKKLTIGSY 
PAIDLSRARS IALASATKVA NGRNPAAEKK VEREKARKPS DLDLVDVVVA QFVVKHVEPK
TRPQSAKEMK RILKREILSR WSGRRLTEIT RSDIRDLLEA IADRAPIMAN RVFEVISSLI
NWSISMEMLS ASPIAGLRKP SPAKRRDRIL SEKELTDVWQ ASERAGWPYG SMIKVLILSG
QRRSEVSDMT WSEIDFEERS WTLPAVRTKN GKGHIIPLSP TIIDVLLTLP RIGSESGFVF
TTNGFSPIRN FARRKKALMM SCQSENNWTL HDLRRTFATG MARLKVELPV VEKLLNHSSG
TFGGVQGVYQ QYDFQSEKRE AMNLWASYVN KITNKLDTIK