| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2077 |
|---|
| Symbol | |
|---|
| ID | 7091443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 2251819 |
|---|
| End bp | 2252535 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643465401 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_002362378 |
|---|
| Protein GI | 217978231 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGCA AGAAGGCCGG CGCGCAGCTG GCTGAGGGCG CCCCGCCGCC GCATTATCTC
GGCCACAGGG ACAGGCTGCG GGAGCGGTTT CGCAAGGCCG GCGCCGAGGC GCTCGCCGAT
TATGAGCTGA TCGAGCTGAT TTTATTCCGG GCGATCCCGC GGCGGGACGT CAAGCCGCTC
GCCAAGGCGC TGATCGCCCG TTTTGGCTCC TTTGCCGAGG TCGTCGCGGC GCGGCCCGAG
CGTCTTGCCG AGATCGAGGG GCTTGGCGAT GCGGCGATCG TCGAATTGCG GATCATAGAA
GCTGCGGCGC GTCGTCTCGC CCGATCCTCG ATCGCAAAGC GGCCGTCAAT GTCGAGCCTG
CCCGCCGTAA TCGATTATTG CCGCACGGCG ATGGCCTTTC TGGATCGCGA AGAATTTCGC
ATCCTTTTCC TCGACAAGAA GAATTTTCTT ATCGCCGATG AGGTGCAGGG CGTCGGAACG
GTCGATCACG CGCCGGTCTA TCCGCGCGAG ATCATGCGGC GCGCTCTCGA ACTTAGCGCC
TGCGCACTGA TTCTTGTCCA CAATCACCCG TCGGGCGATC CCGAGCCTTC GACGGAAGAT
ATTTATCTGA CGCATCAGAT CATCGCGGTC GGCAAGCCGC TGAAGATCAC GGTGCATGAC
CATCTGGTCA TCGGCAAGCA CGGCCATGCG AGCCTCAAGG AAATGCGGCT GATTTGA
|
|---|
| Protein sequence | MSGKKAGAQL AEGAPPPHYL GHRDRLRERF RKAGAEALAD YELIELILFR AIPRRDVKPL
AKALIARFGS FAEVVAARPE RLAEIEGLGD AAIVELRIIE AAARRLARSS IAKRPSMSSL
PAVIDYCRTA MAFLDREEFR ILFLDKKNFL IADEVQGVGT VDHAPVYPRE IMRRALELSA
CALILVHNHP SGDPEPSTED IYLTHQIIAV GKPLKITVHD HLVIGKHGHA SLKEMRLI
|
|---|
| |