Gene Msil_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_2003 
Symbol 
ID7094201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp2176137 
End bp2176850 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content63% 
IMG OID643465329 
Producturea ABC transporter, ATP-binding protein UrtE 
Protein accessionYP_002362307 
Protein GI217978160 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCGCCC TTCTCAAACT CGACAAGGTC TCGGTCGCCT ATGGCCAGAG CCAGGTGCTT 
TGGGACATCG ATCTTGAAAT CGAAGAGGGC GGCGCCGTCG CTCTCATCGG CCGCAACGGC
GTCGGCAAGA CCACGCTCTT GAAGACCATC ATCGGCGCGA TGCGCCTCAA GAGCGGCTCC
ATCTGGTTCA AGGGCAAGGA CGTCTCGAGC TTCCAATCAT TCGAACGGTC GCGGGCGGGG
ATCGGCTTCG TGCCCCAGGG CCGCCATGTC TTTCCGCATC TGACCGTCGA GGAAAATCTC
GAGACGGGGC TCTCGGCGCT GGCGGGACGC GGCCACGCCA TCGGCGGCAT CCCGGAGCAT
ATCTACGAAC TGTTTCCCAA GCTGAAACAG ATCAAGGCGC GCAAGGCGGG CGTCTTGAGC
GGCGGCGAGC AGCAGCAGCT CGCCATGGGC CGCGCGCTCT GCGGCCAGCC GAGCCTTCTC
TTGCTCGACG AACCGACAGA GGGCATTCAG CCGAATGTGG TGCAGCAGAT CGAGGACGCG
CTGCGGCGCG TGCGAACCGA GCTTAAGGTG ACAATCGTCA TCGTCGAGCA ATATCTTGAT
TTCGCCTGGT CCTTCGCCGA CAGCTACACC GTGATGCAGC GCGGTCGCTT GATCCGGCAA
GGCAGCACGC GCGCCGAAAG CGCGGCGGAC GTCGCCCATC TCGTCAATAT CTGA
 
Protein sequence
MSALLKLDKV SVAYGQSQVL WDIDLEIEEG GAVALIGRNG VGKTTLLKTI IGAMRLKSGS 
IWFKGKDVSS FQSFERSRAG IGFVPQGRHV FPHLTVEENL ETGLSALAGR GHAIGGIPEH
IYELFPKLKQ IKARKAGVLS GGEQQQLAMG RALCGQPSLL LLDEPTEGIQ PNVVQQIEDA
LRRVRTELKV TIVIVEQYLD FAWSFADSYT VMQRGRLIRQ GSTRAESAAD VAHLVNI