| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1970 |
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| Symbol | |
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| ID | 7094088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 2142347 |
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| End bp | 2144089 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643465297 |
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| Product | TRAG family protein |
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| Protein accession | YP_002362275 |
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| Protein GI | 217978128 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGA GCACTCTTGC ATATATCGCA GCCGGTGTCT TCGGCGCGGC GATTTGGGGC
TGGCGGACGA AAGAACGCCC AACCACCTTC GGCTCCGCCG ATTGGCTCGC TCCTTGGGTC
GCGAGCAAGA AGGGAATGTT CCACAAGGAC GGCCTGCTGC TCGGCGACTG GACGGGTCTT
CTCCCGGTCT ATTACCGCGG CTCCGGCCAT ATCCTGACCG TCGCCCCAAC CGGCTCCGGC
AAGGGCACGT CCGCCATCGT CCCAAATCTT CTCCAGCATC CTTGGATATT CCTGATCGAT
CCAGGCGGTG AGAACACCGC CATCGCCTCC CGTGCGTGGA GTGAAAAAGG CTACGCGTTT
CACTGCCTCA ATCCATGGGG AATGCTGACG GCTGCTCCTT GGTCGCTGCC TTCGCACAGC
ATCAACCCAC TCAGCATTCT CGATCCTGCG AGCGAGACGT TTTCGAGCGA CGCCGAGCTC
ATCGCCGACA TGATCGTAAC CCGCACGGGA AACGAGAACG GCTCGTCGGC TTATTTCAAG
GAAGAGGCGC GAAGCGGCAT CCGCGCTTTC CTCATGCACA TCATCACGAC GGAGCCAGCT
GAGCGGCAGA CGCTTCTTAC CCTACGCAAA TACATCTCCG CCGACTCCGA AAACTGGGAA
CGGCTTCTGA AAGACATGCA GGCCAATGAG GCTGCTGGCG GCATCATCGC CCGCGAAGCG
GTCGCGCTTG AGCGGCGTGA AACGCAGGCG ACCGAGGAAT TCTCGGCGAT CCTTTCGACG
ATGAAGCAGG ACACGAACTT CATCGAAGAC CCTGTGATGC AGCGCGCGCT CGCGACATCG
ACCGTCGAGC TTTCTGAGCT GAAAGGCTTC AGGAACGGCA CGGCGCTGAA CGGCTGTGTC
GTCTCGGTCG TGATGCCGCT CGAATATCTC GAAACCCACG CGGCGTATGC GCGGCTGATT
GTCGGCTGCG CACTCTGGAC GATGCAGAAG GCACCGCTCT CTAAAGGCCG CGTCCTGTTC
GTGATGGATG AGTTTCCTGC GCTGAAGCGC ATGGATCGCA TCGCTGGCGG TCTTGCGACA
CTGCGCAAAT ATCGCGTCTG GCTCTGGCCG GTCATTCAGA ACCTCGGGCA GCTGAAGCAG
CTCTATGGCC AGAACTGGCA GACCTTCATC TCAAACGCAG GGCTTAGGCA GTTCATCGGC
GCGGGCGATC TCGAAACCGC GCAGTACATT TCAGAGCTCT GCGGCGACGG AACGATCGAA
GTCGTAACCC GCTCGCCTGG CGGCGAGTCG ATCTCGCAAA CACAGCGCCG TCTCGCGACG
GTCGAAGAGG TCATGCACAT CGAGAGCAAA ATGCAGATTG TCTTCGTCGA CAATCTGAAG
CCGATCCTGC TCCGCAAAAC CGAGTATTGG CAGCGGCCTG CGCTGCGGGG GCACTTCAAC
CGAAATCCCT ATCAGTCGGG AACACCTGCT CTCGATACGC GCTCGCCATT CCGGACCCTG
CAAGGCCTCG GCCTGCGCTT CTGCGCATGG ATCGCGGGAC CTTCTCCTGT GGTGATGGCG
GTCCTGTGTT TCTGGCTCGC CAACGCTTCA GGCCTCGGTA TCTCGCTGGT GCCTTGGGTG
CACTCCCAAT ACGGCGGCTG CACGTACCTG ACAACGCACG GCGCGCTTGA ATATCCGATG
CGCGATTACG AGGGGCAGCC AGGCTGCTCC CGGATTGCAT TCAATCTTGG CTACGGCCAA
TAG
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| Protein sequence | MDTSTLAYIA AGVFGAAIWG WRTKERPTTF GSADWLAPWV ASKKGMFHKD GLLLGDWTGL
LPVYYRGSGH ILTVAPTGSG KGTSAIVPNL LQHPWIFLID PGGENTAIAS RAWSEKGYAF
HCLNPWGMLT AAPWSLPSHS INPLSILDPA SETFSSDAEL IADMIVTRTG NENGSSAYFK
EEARSGIRAF LMHIITTEPA ERQTLLTLRK YISADSENWE RLLKDMQANE AAGGIIAREA
VALERRETQA TEEFSAILST MKQDTNFIED PVMQRALATS TVELSELKGF RNGTALNGCV
VSVVMPLEYL ETHAAYARLI VGCALWTMQK APLSKGRVLF VMDEFPALKR MDRIAGGLAT
LRKYRVWLWP VIQNLGQLKQ LYGQNWQTFI SNAGLRQFIG AGDLETAQYI SELCGDGTIE
VVTRSPGGES ISQTQRRLAT VEEVMHIESK MQIVFVDNLK PILLRKTEYW QRPALRGHFN
RNPYQSGTPA LDTRSPFRTL QGLGLRFCAW IAGPSPVVMA VLCFWLANAS GLGISLVPWV
HSQYGGCTYL TTHGALEYPM RDYEGQPGCS RIAFNLGYGQ
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