| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1963 |
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| Symbol | |
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| ID | 7094081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2135191 |
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| End bp | 2139111 |
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| Gene Length | 3921 bp |
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| Protein Length | 1306 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643465290 |
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| Product | hypothetical protein |
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| Protein accession | YP_002362268 |
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| Protein GI | 217978121 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | [TIGR03661] type 1 secretion C-terminal target domain (VC_A0849 subclass) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGGAA TTACTTTTAT TGTCGAAGGC GCCACTGGAT TAGACGAGCA AGACGTAAAG
AACTCTTTCG AAAACCTTCG CAACGCCTCT GGTGATTTTG ATCAAGATAT TCTCTACATT
GCCTCTAAAA CACGCGTTCT CATCATTATC GCGAACGATA CCGTTAGCGG AACATCAGCC
ACGTATCCTG TCACTTCGGG CGACACGGCG TACTATGGCA CCTATGACTA CGTGATCCGA
ATTCCGAAGC AGGGCTTCGA TGGCGATACA TACAATCACG TTGGAACAGA CAAGTGGTCA
TTGGAACGCT TATACGCCCA TGAAGTAGCG CACGTCATGC AAGCCATAGG TGACAACGCA
CCATCGACGC AAGCGGAGCG GGAAGAACAA GCGACGAAAT ATTCAAATCA TATTATGAGC
ACAGCTCATC CCGAGGAGAG CCCGCAGACC CATTACTATA ATACGGAGGG CGATACCGGC
AGCGGCCTCA ATCAAAACTC GGGAAGCGGG GACTCTCCGC ACATTCTGGA CGACAGCAGC
CCACTAAGTG AGAATTTGCC AGGGGCTCCC CTGCCAAGTC AGCTAGCTGC GATTCAACCG
GCATTTGGAG ATGCAATTAA CGCCTCCAGT CCCCTTGTAA TCGACCTTTC CTCGGGTCAC
TCCGGCGTGA CTCTGACCAC GTGGAGCGCT AGTACTACCG AGACGTATTT TGATCTGGAC
GACAATGGCT TTGCCGTTCA GACCGCTTGG GTTAGCGGCG ATACCGGGCT TCTGGCGCGC
GACTTAAACG AAAACGGAAT TATTGACTCC TCGGCAGAAC TGTTCGGGTC TCCGACCGTT
GATGGCTTCG CGAAATTGGC GATGCTCGAT TCAAACCATG ACCTCCGCAT TGATAGCAAT
GATGACGCTT GGGACTCCCT GGTTGTCTGG AATGATGACG GAGACGCGGT CACGCAGAGC
GGCGAACTTC ATTCGCTCGC ATCACTCAAC ATCGCAAACA TCGATCTTGC CGGAGTCGCT
TCCTCAACGA GTACGATCTC CGGAAACTCG ATCAGCCACG TTAGTAAGAT CACCTTCACG
AGCGGTGCAA CGGCAGCGAT CGACGACGCC TGGTTCGTAC ATGACAATAC GAACTCCTTC
TATACAGGCG AGTACACCCT TGATGTCGAC ACACTATTTC TTCCGAGAGT GCGCGGTTAC
GGTACCTTGC CTGATCTGAC TATAGCGATG AGCCTGGATT CCGATCTTAA GGACTTGGTC
TTGGGTTTCG CAGGTACCGA TCTGTCCGAA TTCGCAGATG CCAAAACTGC AATTACGGAC
ATCCTCTATA AATGGGCTGG CGTGGAAGGC GTCGATCCCG ACAGCAGAGG CATTTGGGTT
GATGCCCAGC ATCTAGCTTT CCTTGAACAG TTCATCGGAA GTGACTTCCT TCAAATCACA
ACCCACTCTG CAGACCCGCA GCCATGGGCT GGGGCACTGA TCGAGGACGC CTATCAGGCG
GCCTTCGCGA TGTTGTCGGC GGACATATTG GTCCAGACGG GTTTTGGTCA GCTGTTTGAC
ACCGCCATTA CGTACAACCC TTCGTCTGGC ACTCGTACCG GTGACACTGA TCTATCTGAG
GACGCAATCG ATGATCTCGT CAGCATCGCT CCTTCGTCTG GACCTGAGAA TGAGGCGTTC
TGGGTGTCGG TCGCGTGGGC GCTGGATGTT ACGAAGGGCA TTTCGAATCT GAGTTACGAC
GAGACGACAT GGCTCTCCGA CGCAATCACG GCGTCCAATG CATTGTCGGA CTGGGCAACG
GTCTTACACA GCTACGACCC GTCCGCCGGC ACCGCCTCGC AAAACGGCAC AAATGGAGCT
GAAACCCTTT ATGGAGACGT GACCGCGGAT ACCATCCATG GCTTCAACGG CGCTGACACC
ATCTACGGAG ACTACGGCAA CGACATCCTC TACGGCGACG ACGGCAACGA TGTCATCTAT
GGGGATGAAG GCGCTGATGT GCTTTATGGA GGAGCCGGTA ACGATCATCT TTATGGAGGC
GACGGCAACG ATACGATCCA TGGCGAGTAC GGTAACGACA CCCTGGACGG CGGAGCTGGC
GGGAACTTCC TGAGCGCTCT AACGGGCGAT GACACCTTCG TTTATGGAGG AGGTCACGAT
GTGATTAGCG ATACCGGCGG TTCGGATCAG TTGCTTCTGC CATCAGGGAT CGTCTTAGGC
GACCTGACTT TCCAGAGAGT TTCGACGGAA GGCAGCCTTT CGTATTTCGA CGACCTCCTC
ATCAACATTG ATGGTGCCGG TACAATCGAG ATCAAGGCAC ATTTCCAAAG TTCCTCGTTC
CGTATTGAGA CGCTGGTGTT CTCCGACACC AGCACGCTGG ATTTAACGAC CCTTGCAAAT
CCAGATGTGT ACCTAACGGC GGGAAATGAC ACGTTTACCA GCGGCGCGAC TGGCGCCTTC
GCTATCTACG GAGGCGATGG TGATGACTAT ATGTCCGATT ATCAAAATGC TGCTCACACC
TTCGACGGTG GCAACGGCAA TGATGCGATG TACGGAGGAG CTGGCAACGA TACTTACATC
GCGAGCACCG GCTTCGATAC AATCAGCGAA AATGCAGGGA CAGACACAAT CGTCGTCCCA
GCCGCATTCA CGATTGATGA CGTGACCTTC TACCGAATCC TAAATGGAAG CGGCCCAACC
GATAACCTTG GCATCTCGAT CAATGGCCTC GGCGAAATCG CCGTGATCGC GCAATTTTCG
AGTGCGCTGG TTGAGTACAT GCACTTTGAC AACGATAACA GCACAATATC ACTGTCAGGC
CTCTCCATCA CAACGGTTGG AACGGCAGGG AATGATAACC TGAGTCCTCC TAGCACTCAT
GCGGGAGCCA ACGATATTCT AGACGGGAGA GAGGGCGACG ATTACGTCAA TGGAGGCAGT
GGCGACGACA CGTACATATT CTCTGCGGGC CACGACACAA TCACTGAGAG CAGCGGGGAT
GACACGATCC TTGTCCGAAG TAGCTATGCG CCGGGTGACA TCTCCATTTC ATTTGTCCCG
TATTACTACG ACACCACTGG GATGCGCTTA GAAGATACGG ACGGAAACTC GATTACCGTT
TACAGGCAAG GATACAGCTC GGGATACGTC GTTGAGCACG TCGCTTTTGC CGACACGACC
GTCTGGAATC TGAGCTCGAT GGAAATCGAA ACCCACGGCA CGAGCAGTGC CGACTATCTC
TACGGCCATG ATGTCGGCGA CGCGAGCAGT GCCGATACGA TCTACGGCTA TGCGGGAAAT
GACACCATCG ACGCGGGTGA TGGCAACGAT CTGGTCTATG CAGGCGATGG CGCTGACTAC
GTCTACGCGA GCAACGGGAA CGATACAGTG TATGGCGGCA ACGATGCCGA TGAGTTGCAC
GGCAAGTTCC ATAGCGTGCT GTATGGCGAG GCTGGCAACG ATGATCTATA CGCAAACCCG
TATTCGAACG AAGCTGCTGG CACTCTCGTG ACGCTGTTTG GCGGCGATGG AGCCGATACC
CTTCATGGCG GCAACTACGG CGAAACTGTC ATGCATGGTG GGAACGGCGT TGATACCATG
ATCAGTGCCT ATGGCACGGA CACCTTCGCG TTTGATGCAG CGAGCGCTTT CAATGCGGTG
GACGTTATCC AGCAGTTCAA CACGTCTGAA CACGACAAAA TCGACATATC GGACGTTCTT
GACGGTCACT ATGATCCGCT TACGGACGCG ATCACCGATT TCGTTCAGAT CACGACCAGC
GGCAGCAACT CAGAGCTATT TGTCGATACG ACTGGCAGCG CAACCTTCGG ATCATCCCAG
CATATTGCCA CCATTCAATA TATTACCGGA CTGACTGACG AGGCGGCGCT CGTGACAGCC
GGAACGCTCA TAGCCGCGTA G
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| Protein sequence | MSGITFIVEG ATGLDEQDVK NSFENLRNAS GDFDQDILYI ASKTRVLIII ANDTVSGTSA
TYPVTSGDTA YYGTYDYVIR IPKQGFDGDT YNHVGTDKWS LERLYAHEVA HVMQAIGDNA
PSTQAEREEQ ATKYSNHIMS TAHPEESPQT HYYNTEGDTG SGLNQNSGSG DSPHILDDSS
PLSENLPGAP LPSQLAAIQP AFGDAINASS PLVIDLSSGH SGVTLTTWSA STTETYFDLD
DNGFAVQTAW VSGDTGLLAR DLNENGIIDS SAELFGSPTV DGFAKLAMLD SNHDLRIDSN
DDAWDSLVVW NDDGDAVTQS GELHSLASLN IANIDLAGVA SSTSTISGNS ISHVSKITFT
SGATAAIDDA WFVHDNTNSF YTGEYTLDVD TLFLPRVRGY GTLPDLTIAM SLDSDLKDLV
LGFAGTDLSE FADAKTAITD ILYKWAGVEG VDPDSRGIWV DAQHLAFLEQ FIGSDFLQIT
THSADPQPWA GALIEDAYQA AFAMLSADIL VQTGFGQLFD TAITYNPSSG TRTGDTDLSE
DAIDDLVSIA PSSGPENEAF WVSVAWALDV TKGISNLSYD ETTWLSDAIT ASNALSDWAT
VLHSYDPSAG TASQNGTNGA ETLYGDVTAD TIHGFNGADT IYGDYGNDIL YGDDGNDVIY
GDEGADVLYG GAGNDHLYGG DGNDTIHGEY GNDTLDGGAG GNFLSALTGD DTFVYGGGHD
VISDTGGSDQ LLLPSGIVLG DLTFQRVSTE GSLSYFDDLL INIDGAGTIE IKAHFQSSSF
RIETLVFSDT STLDLTTLAN PDVYLTAGND TFTSGATGAF AIYGGDGDDY MSDYQNAAHT
FDGGNGNDAM YGGAGNDTYI ASTGFDTISE NAGTDTIVVP AAFTIDDVTF YRILNGSGPT
DNLGISINGL GEIAVIAQFS SALVEYMHFD NDNSTISLSG LSITTVGTAG NDNLSPPSTH
AGANDILDGR EGDDYVNGGS GDDTYIFSAG HDTITESSGD DTILVRSSYA PGDISISFVP
YYYDTTGMRL EDTDGNSITV YRQGYSSGYV VEHVAFADTT VWNLSSMEIE THGTSSADYL
YGHDVGDASS ADTIYGYAGN DTIDAGDGND LVYAGDGADY VYASNGNDTV YGGNDADELH
GKFHSVLYGE AGNDDLYANP YSNEAAGTLV TLFGGDGADT LHGGNYGETV MHGGNGVDTM
ISAYGTDTFA FDAASAFNAV DVIQQFNTSE HDKIDISDVL DGHYDPLTDA ITDFVQITTS
GSNSELFVDT TGSATFGSSQ HIATIQYITG LTDEAALVTA GTLIAA
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