Gene Msil_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1922 
Symbol 
ID7094038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand+ 
Start bp2093474 
End bp2094007 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content65% 
IMG OID643465249 
Product2'-5' RNA ligase 
Protein accessionYP_002362229 
Protein GI217978082 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC TCTTCACCGG CATCGAAATT CCGCCGGAAG TCGCGACCGA TCTGTCCCTG 
ATGCGCGGCG GCATTTATGG CGCGCGCTGG ATCGATGTCG AGAACTACCA CATCACCCTG 
CGCTTCATCG GCGACATCGA CGATTCCTCC GCCGACGACG TTCACATGGC GCTGGAGCAG 
ATCCGCCGAA AACCGTTTGA GGTGACCCTG GAAACGCTCG GTTCTTTCGG CGGGGACAAG 
CCCCGCGCGA TTGTCGCCAA GGCGAAGCCA GCGGCCCCCC TCGTCGAATT GCAGGCGCAG 
CAGGAGCGGT TGCTGCGACG GATCGGCATT GCGCCGGAGC CGCGCAAATT CACGCCGCAT 
GTGACGCTGG CGCGGCTTCG AGCGGCCTCG TCCATGGCGG TCGCCGATTA TCTGTCGACG 
CGCGGGTTTT TCTTCTCGCG CCGCTTCGAA GCCAGCCGCT TCGTGCTGTT CTCCTCACGC 
GCCTCGACGG GCGGCGGCCC CTATGTCGTC GAGGCGGCCT ACCCGCTGGG ATAG
 
Protein sequence
MPRLFTGIEI PPEVATDLSL MRGGIYGARW IDVENYHITL RFIGDIDDSS ADDVHMALEQ 
IRRKPFEVTL ETLGSFGGDK PRAIVAKAKP AAPLVELQAQ QERLLRRIGI APEPRKFTPH 
VTLARLRAAS SMAVADYLST RGFFFSRRFE ASRFVLFSSR ASTGGGPYVV EAAYPLG