| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1850 |
|---|
| Symbol | |
|---|
| ID | 7094129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 2013953 |
|---|
| End bp | 2014825 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643465177 |
|---|
| Product | Diaminopimelate epimerase |
|---|
| Protein accession | YP_002362157 |
|---|
| Protein GI | 217978010 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.501367 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCC TCGCCAACCG GCTCGCCGTC AAGATGAACG GCATAGGCAA TGAGATCCTC
ATCGTCGATC TGCGCGGCGC CGGCGCCGGC GTCACGGGCC CGCAGGCGCG CGCCATCGCC
CGCACGAAGG GGCTCGCCTT CGATCAACTG ATGGTTCTGG AAGACCCGCG CTCCAAAGGC
TGCGCGGCTT TCGTGACGAT CTTTAACGCC GATGGCTCGC AATCGGCCGC CTGCGGCAAT
GGCACGCGCT GCGTCGCCTG GACCTTGCTG AAGGATGGCG CGCGGGACGA AGTGTTGCTC
GAGACGGCGG CCGGGCGGCT CGCCTGCCGC CGCGTCAGCG AGCTGGTCTT TTCCGTCGAG
ATGGGGCGCC CCCGGCTGAA GGCTGCCGAG ATCCCGCTGA GCCGGGACGC GCCCGACACA
AGCGCGGTCG ATCTTTCTTT CGGGCCAGCC GATTCGCCCA TCCTGAAAAA TCCGGCCGTG
GTGAATATGG GCAATCCGCA CGCGATCTTT TTCGTGGAGG ATATCGGCGC CTATGATCTC
GCCGCGATCG GCCCTGTGCT CGAACATGAT CCGCTCTTTC CCGAACGGGC CAATATTTCG
CTGGCGCGCA TCGTCTCGCC CGAGCGCATC GAGCTGAAGG TCTGGGAGCG CGGCGTCGGC
CTGACGCTCG CCTGCGGCTC GGCCGCCTGC GCGGCGCTGG TCGCGGCTGC GCGGCGGGGA
CTCACAGGCC GGCGCGCGAC CGTCGCCCTC CCTGGGGGCG AGTTGGACAT TTTTTGGCGC
GAGAGCGACG ATATGGTCGT CATGACCGGG CCGGTTGCGT TCGAATTCGA GACCCGGCTC
GATCCGGCGA TTTTCGCGGA CGCCGCGGCG TGA
|
|---|
| Protein sequence | MNPLANRLAV KMNGIGNEIL IVDLRGAGAG VTGPQARAIA RTKGLAFDQL MVLEDPRSKG
CAAFVTIFNA DGSQSAACGN GTRCVAWTLL KDGARDEVLL ETAAGRLACR RVSELVFSVE
MGRPRLKAAE IPLSRDAPDT SAVDLSFGPA DSPILKNPAV VNMGNPHAIF FVEDIGAYDL
AAIGPVLEHD PLFPERANIS LARIVSPERI ELKVWERGVG LTLACGSAAC AALVAAARRG
LTGRRATVAL PGGELDIFWR ESDDMVVMTG PVAFEFETRL DPAIFADAAA
|
|---|
| |