| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1822 |
|---|
| Symbol | |
|---|
| ID | 7094101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1985948 |
|---|
| End bp | 1987699 |
|---|
| Gene Length | 1752 bp |
|---|
| Protein Length | 583 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643465149 |
|---|
| Product | Poly-beta-hydroxybutyrate polymerase domain protein |
|---|
| Protein accession | YP_002362129 |
|---|
| Protein GI | 217977982 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
|---|
| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0497767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC AGCTTTTTCC TCAGCCTGTT GGTCCCGCGG TGGTCAAGCC GCCAGAGGCA
GACGGCGCCC AGTTCAATGC GCTCGACAGC GCGCTGCACG CTGCCGAGGG TAATTTTTCC
GGCGGCCTCT CGGTTTGCGC GCATTGGCTC GCCTTCCTCG ACTGGGGCGC GCATCTTGCC
AATGCGCCGT TTCGCCGACT CGAACTGGCG CAGGCGGCGG CCCGGCAATG GCGTCGTTTC
GAAGGCGCCG TCAGTGGCGA AAGGCCGATC GAACCGCCGG CGGGCGATCA TCGCTTCAAC
GACCCAGCCT GGCGCGACCC GCCCTTCAAC GCGATCTCGC AAGGCTTCCT CCTCGCCGAG
GAATGGTGGG CGCTGGCGAC CAAGGGGGCG CGCGGCGTCA ACGCCGACAA TCAGCGCATC
GTTTCTTTCG CCATGCGCCA GTTGCTTGAC GTCTGGTCGC CGTCGAATTT TTTCTGGCTC
AACCCCGAAG CGCTCCGCGC GACGATGAAG TCGGGTGGCG TCAATCTCGT CCATGGCGCC
GAAAATCTCC TGACCGATTT TCAGGAATCG GTGACCGGGC GTCCCTGCGG AGGCGATGGA
TTTCGCGTCG GGCGCGATAT AGCCGCGACG CCGGGCAAAA TCGTCTTCCG CAACGAGTTG
ATCGAACTCA TCCAATATGC GCCGACGACA GCAAGCGCGC ATCCTGAGCC GGTGATGATC
GTTCCGGCCT GGATCATGAA ATATTACATT CTCGACCTGT CGCCGGAGAA TTCCCTCATC
CGTTTCCTCG TGGCGCAGGG CTATACGGTG TTCGCCTTGT CCTGGCGCAA TCCCGGGCCG
GCGTTCCGCG ATTTCACGCT CGACGATTAC CGCGTCAAGG GCGTGATGAG CGCGCTCGAC
GCTGTGAGCG ACATCTGCGG CGAGGCTAAA ATTCACGCCT GCGGCTATTG CCTCGGCGGC
ACCATTTTGA CCATTGCGGC GGCCGCGATG GCGCGCGACG GCGATGAGAG GCTCGCCAGC
GTCACTTTGT TTTGCGCGCA GACCGATTTC ACCGAAGCCG GCGAATTGAA GCTGTTCATC
ACCGAGGATC AGCTCGCTTT CCTTGATGAC GTGATGCGCG CGCAAGGCTA CCTCGACAGC
CGCCAGATGG CGGGGGCGTT TCGTCTGCTC CGCTCCAATG ATCTGATCTG GTCGCGCATG
ACGCGGTCCT ATCTCATGGG CGAGCGCGAA CATCCGAACG ACCTTCTGAC CTGGAATGCG
GACGGCACGC GCTTGCCGGC GCGCATGCAT AGCGAATATC TGCGCCGCCT CTTTCTCGAC
AATGATCTCG CCGAAGGGCG GTTCTTGGTC GCGGGCAGGC CGGTCGCAAT CAGCGATATC
CGCGCGCCGC TGTTTGTGGT GGCCACAGAA ACGGACCACA TCGCGCCCTG GCGGTCCGTC
CACAAGATCG AGCTCTTAAA TGACGCCGAC CTGACCTTTG TTTTGACGTC GGGCGGCCAT
AACGCCGGCG TGGTGAGCGA GCCCGGTCAC AAGCATCGGC ATTATTCGAT CGGCCGCCGC
AAGGTCGGCG CGCTCTACAT CGGGCCGGAC GATTGGCTCG CCCAAGCGGA GCGATGCGAG
GGCTCGTGGT GGCCCGCCTG GTGGGAGTGG CTCGACGCGA ACTCCGGGCC GCGCGTCGCG
CTTCCCGCGA TGGGCTCCGT GCATTATCCG GCGATCGCGG ACGCGCCCGG TTCTTACGTG
CTTGAGGATT GA
|
|---|
| Protein sequence | MNKQLFPQPV GPAVVKPPEA DGAQFNALDS ALHAAEGNFS GGLSVCAHWL AFLDWGAHLA
NAPFRRLELA QAAARQWRRF EGAVSGERPI EPPAGDHRFN DPAWRDPPFN AISQGFLLAE
EWWALATKGA RGVNADNQRI VSFAMRQLLD VWSPSNFFWL NPEALRATMK SGGVNLVHGA
ENLLTDFQES VTGRPCGGDG FRVGRDIAAT PGKIVFRNEL IELIQYAPTT ASAHPEPVMI
VPAWIMKYYI LDLSPENSLI RFLVAQGYTV FALSWRNPGP AFRDFTLDDY RVKGVMSALD
AVSDICGEAK IHACGYCLGG TILTIAAAAM ARDGDERLAS VTLFCAQTDF TEAGELKLFI
TEDQLAFLDD VMRAQGYLDS RQMAGAFRLL RSNDLIWSRM TRSYLMGERE HPNDLLTWNA
DGTRLPARMH SEYLRRLFLD NDLAEGRFLV AGRPVAISDI RAPLFVVATE TDHIAPWRSV
HKIELLNDAD LTFVLTSGGH NAGVVSEPGH KHRHYSIGRR KVGALYIGPD DWLAQAERCE
GSWWPAWWEW LDANSGPRVA LPAMGSVHYP AIADAPGSYV LED
|
|---|
| |