| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1785 |
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| Symbol | nirA |
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| ID | 7090902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1946669 |
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| End bp | 1948441 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643465113 |
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| Product | ferredoxin-nitrite reductase |
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| Protein accession | YP_002362093 |
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| Protein GI | 217977946 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02435] precorrin-3B synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCG ATTTTTCTCC AGAGCAAAAG CGTTATCTCG AAGGCTTCGC CTCGGGCCTG
CAGATCGCGC GTGCGGGGCG CTCGCTCAAT CCGACTGGCG CGCCGGGGGC GGCGGCGCCG
AGCGGCCCGG ACGCGCCCCA CCTCGCCGCC ATGGCGCGGC AGGAGGCGCA GGGCAGGAAG
CTCGCCGATC AGGAAAAATG GAAGCGCGAA GAACACCCTT TCGACGCCTT TCACCGGCTG
AAGGAACAGG CCCGCCGCGA CGAATTCCCC AAACCCCCGG ACAATTTCCG CTGGCGCTAC
TATGGGCTCT TCTATGTCGC GCCCAATCAG GACGCCTATA TGTGCCGGCT GCGCATCCCC
AACGGGGTGG TGACGCATTG GCAACTGGCC GCGCTCTCGG ACGTTGCCGA CCGCTTCGCC
GGGGGCTTCA GCCATGTGAC GACGCGGGCC AATCTCCAGC TGCGCGAGAT CCCGGCGCGG
CACGCGACAA ACGTCGTCGA GGCGATCCAG GATATCGGCC TTTCCTCGCG TCATTCGGGG
GCGGACAATA TCCGCAACGT CACCGGCGAC GCCACTGCGG GCTTTGGCGT CACCGAGCTG
CTCGACACGC GTCCCTATGC GCGCGAATGG CACTTCCATG TGCAGAACGA ACGCGTCATG
AGCGGATTGC CGCGAAAATT CAATGTCGCC TTCGATGGCG GCGGGGCCAT TGCGACGCTT
GAGGACACCA ATGACATCGG CTTCCAGGCG GTGGAGGTTC TCCCGAGCGC GAGCGTTCCG
GCCGGCGTCT ATTTCCGCCT GCTTCTCGGC GGCATCAGCG GTCACAAGGA TCTCGCGCGT
CCGACCGGCG TCGTGCTCGA TCCGGCGGAG GCGGCGAAGA TCGCCAACGC CATCGTCCTC
GTGTTCATCG ATCGCGGCAA TCGCGCCGAC CGCAACAAGG CGCGGCTGAA ATATGTGCTC
GACGAGATGG GCTTCGACGC TTTCCTAAAA CTCGTCGAGG AAAAGCTCGG TCATCCTTTG
GCGCGGATCG ATGAGAGTCA TATCGCCCCG CGTCCGGCGC AGGACCGGCA GGCCCATATC
GGCGTTCATC CGCAGCGCCA GCCGGGCCTC TCTTATATCG GCCTCGTTCT GCCGGTCGGA
AAACTGACCA GCGACCAGAT GCGTGAGGTC GCCGCCATCG CGAGCGGCTG CGGCGATGGC
GAAATCCGGC TGACCGTCTG GCAGAATTTA CTGCTTCCCG GCATCACCGA GGACAAGCTC
GATGAGGCGA AATCCCGCAT CGAGGCGGCA GGTCTCGAAT GGCGCGCCTC CAGTCTTCGC
GCGGGCCTCA TCGCCTGCAC CGGGTCGAAG GGCTGCCGCC TCGCCGCCGC CGACACCAAG
GGGGCCGCGC AAGCCATAGC CGCCTATTGC GAGCCGCGGG TGGAGCTGGA CCAACCCGTC
AATATCCATG TCACTGGCTG CCATAATTCC TGCGCGCAGC ATTATATTGG CGACATCGGG
CTGATCGGCG CGCGCGTCGC TGAGGATCCC GACAATGAAG AGAGCGAAAC GGTCGACGGC
TTCAACGTCT TCGTCGGCGG CGGCTATGGC GCGGACGGCG CCATCGGCCG CGAGCTTGTG
ACGAACGTCA AGGCGAGCGA TGCGCCGCAA CTTGTCGAAA GCCTGCTCAA GGCCTATCTC
GCCGAGCGCG CGTCGCCGGA CCAGAGCTTC CAGCATTTCA CCGCGAGCCG CTCGCTTGAA
GATCTGCAAT CGATGGTAAA GGGCGTCGCA TGA
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| Protein sequence | MSGDFSPEQK RYLEGFASGL QIARAGRSLN PTGAPGAAAP SGPDAPHLAA MARQEAQGRK
LADQEKWKRE EHPFDAFHRL KEQARRDEFP KPPDNFRWRY YGLFYVAPNQ DAYMCRLRIP
NGVVTHWQLA ALSDVADRFA GGFSHVTTRA NLQLREIPAR HATNVVEAIQ DIGLSSRHSG
ADNIRNVTGD ATAGFGVTEL LDTRPYAREW HFHVQNERVM SGLPRKFNVA FDGGGAIATL
EDTNDIGFQA VEVLPSASVP AGVYFRLLLG GISGHKDLAR PTGVVLDPAE AAKIANAIVL
VFIDRGNRAD RNKARLKYVL DEMGFDAFLK LVEEKLGHPL ARIDESHIAP RPAQDRQAHI
GVHPQRQPGL SYIGLVLPVG KLTSDQMREV AAIASGCGDG EIRLTVWQNL LLPGITEDKL
DEAKSRIEAA GLEWRASSLR AGLIACTGSK GCRLAAADTK GAAQAIAAYC EPRVELDQPV
NIHVTGCHNS CAQHYIGDIG LIGARVAEDP DNEESETVDG FNVFVGGGYG ADGAIGRELV
TNVKASDAPQ LVESLLKAYL AERASPDQSF QHFTASRSLE DLQSMVKGVA
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