Gene Msil_1783 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1783 
Symbol 
ID7090900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1944320 
End bp1944955 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content58% 
IMG OID643465111 
Productprotein of unknown function DUF1007 
Protein accessionYP_002362091 
Protein GI217977944 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGGC GTTTTTTGGT TTCGATTGCG CTTTTCATAG CGGCCGCCAG CCCCGCGAGC 
GCCCACCCCC ATGTCTGGAT CAATGGGCAG GAGAGCGTGG TTTTTAGCCC CGCCGGCGAG
ATCGTCGCGA TCCGCCACGT CTGGGTTTTT GACGAAATGT ATTCGGCCTT CGTGACCGAG
GGCGCCGGCA AGAAGGGCGC GCTTTTGACC AAGGCGGACC TTGCCCCGCT GGCGAAAAGC
AATGTCGAGG ATCTCGCCGA ATTCGATTAT TTCACCCATG CCAAGGTCAA GGGCGTGAAG
CTGGAGTTCC TTGAGCCGAC CGATTATTCG CTCGAGGAGC GGCCGGACAA GCTCGTCGAA
TTGCGCTTCA CCATGCCCCT GAAGCAGCCG ATCGCGCCGA AGATCTTTTC GTTTCAGGTC
TATGACCCGA CCTATTTCGT CGCCTTCGAA CTCGACAAGC AAAATCCCGT CAGCTTCGTC
AATGCGCCGA AGGGATGCTC GACCAATATC GCTGGCGCCA AAAAGCTGGC GGACGATGAA
TCGAAGAAGC TGACCGAATC CTTTTTCAGC GGCCTGTCGC CGGGAAGCGA TTTCGGCGTA
AAACTCGCCT CGTCCGTCGT GGTCGCCTGT CCGTGA
 
Protein sequence
MRGRFLVSIA LFIAAASPAS AHPHVWINGQ ESVVFSPAGE IVAIRHVWVF DEMYSAFVTE 
GAGKKGALLT KADLAPLAKS NVEDLAEFDY FTHAKVKGVK LEFLEPTDYS LEERPDKLVE
LRFTMPLKQP IAPKIFSFQV YDPTYFVAFE LDKQNPVSFV NAPKGCSTNI AGAKKLADDE
SKKLTESFFS GLSPGSDFGV KLASSVVVAC P