Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1783 |
Symbol | |
ID | 7090900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1944320 |
End bp | 1944955 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643465111 |
Product | protein of unknown function DUF1007 |
Protein accession | YP_002362091 |
Protein GI | 217977944 |
COG category | [R] General function prediction only |
COG ID | [COG3683] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 63 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGGGC GTTTTTTGGT TTCGATTGCG CTTTTCATAG CGGCCGCCAG CCCCGCGAGC GCCCACCCCC ATGTCTGGAT CAATGGGCAG GAGAGCGTGG TTTTTAGCCC CGCCGGCGAG ATCGTCGCGA TCCGCCACGT CTGGGTTTTT GACGAAATGT ATTCGGCCTT CGTGACCGAG GGCGCCGGCA AGAAGGGCGC GCTTTTGACC AAGGCGGACC TTGCCCCGCT GGCGAAAAGC AATGTCGAGG ATCTCGCCGA ATTCGATTAT TTCACCCATG CCAAGGTCAA GGGCGTGAAG CTGGAGTTCC TTGAGCCGAC CGATTATTCG CTCGAGGAGC GGCCGGACAA GCTCGTCGAA TTGCGCTTCA CCATGCCCCT GAAGCAGCCG ATCGCGCCGA AGATCTTTTC GTTTCAGGTC TATGACCCGA CCTATTTCGT CGCCTTCGAA CTCGACAAGC AAAATCCCGT CAGCTTCGTC AATGCGCCGA AGGGATGCTC GACCAATATC GCTGGCGCCA AAAAGCTGGC GGACGATGAA TCGAAGAAGC TGACCGAATC CTTTTTCAGC GGCCTGTCGC CGGGAAGCGA TTTCGGCGTA AAACTCGCCT CGTCCGTCGT GGTCGCCTGT CCGTGA
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Protein sequence | MRGRFLVSIA LFIAAASPAS AHPHVWINGQ ESVVFSPAGE IVAIRHVWVF DEMYSAFVTE GAGKKGALLT KADLAPLAKS NVEDLAEFDY FTHAKVKGVK LEFLEPTDYS LEERPDKLVE LRFTMPLKQP IAPKIFSFQV YDPTYFVAFE LDKQNPVSFV NAPKGCSTNI AGAKKLADDE SKKLTESFFS GLSPGSDFGV KLASSVVVAC P
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