Gene Msil_1769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1769 
Symbol 
ID7090881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1924878 
End bp1925447 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content68% 
IMG OID643465092 
Productisochorismatase hydrolase 
Protein accessionYP_002362077 
Protein GI217977930 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTC TCGATCCCCG CTTCGCTGCC CTCGTCCTGA TCGATCTTCA GGCCGGTATT 
GTCAGCCGCC AGCTCGCCCC GCGCGGCGGC CCTGACGTCG TGAACGCCGG TAGAATGCTT
GCCGAGCGTT TTCGGGCGGC CAGATCGCCC GTCGTCCTGG TCCGGGCGGC GTTCGCGGCC
GATTTCGCGG ATGCGCCGCC CGGCCTGGTC GACGAGCCGA TGCCGCGGCC GGAAGGCGGT
TTTCCGCCGG ACTGGACGTC GCTTGCGGAC GGGCTTGCCG AGCCGACCGA CATCCTCATC
ACCAAGCGGC AATGGGGCGC GTTTTATGGC ACGGAGCTCG ATCTGCAGCT TCGGCGCCGG
GGCGTCCGCA CGCTGGTCAT TGGCGGCGTG GCGACGAATT TCGGCGTGGA ATCCACCGTC
CGCCAAGCGT GGGAATATGG CTATGACGTC TGTGTGGCGG AGGACGCTTG CGCCAGCGTT
TCCGCCGAAC TTCATGATGT CGCGATCCGG CATATTTTTC CGCGCGCCGC GCGCGTCGTG
CAGGCGGCCG ACATCGCCTT CGCCGCCTGA
 
Protein sequence
MIALDPRFAA LVLIDLQAGI VSRQLAPRGG PDVVNAGRML AERFRAARSP VVLVRAAFAA 
DFADAPPGLV DEPMPRPEGG FPPDWTSLAD GLAEPTDILI TKRQWGAFYG TELDLQLRRR
GVRTLVIGGV ATNFGVESTV RQAWEYGYDV CVAEDACASV SAELHDVAIR HIFPRAARVV
QAADIAFAA