| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1735 |
|---|
| Symbol | |
|---|
| ID | 7094010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | - |
|---|
| Start bp | 1885634 |
|---|
| End bp | 1886449 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643465058 |
|---|
| Product | Ku protein |
|---|
| Protein accession | YP_002362043 |
|---|
| Protein GI | 217977896 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1273] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02772] Ku protein, prokaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.425167 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCCGC GTTCATTCTG GAAAGGTTAT CTGAAGCTCT CGCTCGTGAC CTGCCCCGTG
GTCATGGCGC CGGCGAAATC CGAAAAGGAA AAGCTGCGCT TTCACACGCT GAACCGGGCT
ACCGGCAACA GGGTGCAAAG CCGCTACATC GATTCGGTTT CGGGCAAGCC TGTAGATTCG
GCCGATCAGG TCAAGGGCTT TCCGCGCGAC GATCAGTCTT ACGTCATGCT CGAAGATGAG
GAACTCGATT CCGTCGCGCT GGAGAGCGCC CGCACGATCG ACATCGAGCT GTTCGCGCCG
GCCGACTCGA TCGACTGGAT CTGGTATGAC GCGCCGCACT ATCTGACCCC GGGCGACGAA
GTTGGAGAGG AAGCTTTCGC CGTCATCCGA GAGGCGATGA AGGCGACCAA AATGGTCGGG
ATTTCCCGCC TCGTGCTCTA CCGCCGCGAA CGCGCGGTGT TGCTGGAGCC GCGCGGCAAG
GGCATCATCC TATGGACGCT GCGTTATGGC GACGAGGTGC GCGATCCAAA GCTCTATTTC
GACGCCATCA AGGATCAAAA GCCGGTCCCC GAGCTGTTGT CTCTCGTTAA CAGGCTGATC
GAGGAGCGCG TTAAACCCTG GAGCCCGGAG ATGGCGAGCG ATCCGGTGCA GGATCGGCTG
CGGGATATCA TCGAGGCCAA GAAAACGCCG CCGGCGAAAA AGACCAAAGC CGAGGAAAAG
ACGGGGAAGG GCAGCGCGGA GAGCAATGTC ATCGACATCA TGGACGCCCT GCGCAAAAGC
CTCGGTCCGG CTGCGAAAAA GCCCAAGGGG CGCTGA
|
|---|
| Protein sequence | MAPRSFWKGY LKLSLVTCPV VMAPAKSEKE KLRFHTLNRA TGNRVQSRYI DSVSGKPVDS
ADQVKGFPRD DQSYVMLEDE ELDSVALESA RTIDIELFAP ADSIDWIWYD APHYLTPGDE
VGEEAFAVIR EAMKATKMVG ISRLVLYRRE RAVLLEPRGK GIILWTLRYG DEVRDPKLYF
DAIKDQKPVP ELLSLVNRLI EERVKPWSPE MASDPVQDRL RDIIEAKKTP PAKKTKAEEK
TGKGSAESNV IDIMDALRKS LGPAAKKPKG R
|
|---|
| |