Gene Msil_1734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1734 
Symbol 
ID7093194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand
Start bp1884771 
End bp1885619 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content62% 
IMG OID643465057 
ProductKu protein 
Protein accessionYP_002362042 
Protein GI217977895 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.675504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCGC GCGCGAACTG GAAAGGCGTC CTGAAGGTCG CCGAACTGAC CTCACAGATT 
TCGCTGTTCA CCGCCGCCTC GACTTCGGAG CGCATCGCGT TTCATACGCT AAATCGCAAA
ACCGGCCATC GCGTGCAGCG GCAATTCATC GACGCCGAAA CCGGAAAGCC GGTGGCGCCG
GACGATCAGG TCAAGGGCTA TGAGACCGGG CATGGCGAAT ACGTCATGCT TGAGGCTGAC
GAGATTGCGG CGGCCATTCC CGAAAGCGAC AAGACGCTCG ACGTCCAGGC CTTCATCTCC
TGCGACGAAG TCGACGACGT TTTCTTTGAT CGCCCCTATT ATCTGGCGCC AAGCAACCAG
GCCACCGAGG AGGCTTTCGC GCTGCTGCGC GAGGGGATGC GCGCAAAAAA GGTTGCAGCG
CTGGCGCGCG CGATGCTGTT TCGCCGGATG CGCTCGCTGC TGATCCGCCC CTCTGGCGCC
GGACTGATCG CGAGCACCCT CAACTTCGAT TATGAAGTCC GCTCCGCCGA CGAAGCCTTC
GCCGATGTGC GCGACGTCAA GATCGAGGGC GAGATGCTTG ATCTCGCCGA ACACATCATC
AAGACGAAGA CCGGCAAGTT TGACGTCAGC AAGTTCGACG ACCGCTATGA GGCGGCCGTC
GCCGCTCTCG TCAAGGCGAA GCTTGAAGGC CGCAAGATCG AGCCGCCAAA ACCGGTCGCG
GCGACCAATG TGACGAGCCT GCTCGACGCG CTGAGGGAGA GCGCCAAAGG GACCGCCAGG
GCGACAGCGA AATCGACCTC GAAGGCGAGC GAGGCAAAAA CCCGCGCGCC GCGGAAAAAG
GCGAGCTGA
 
Protein sequence
MAPRANWKGV LKVAELTSQI SLFTAASTSE RIAFHTLNRK TGHRVQRQFI DAETGKPVAP 
DDQVKGYETG HGEYVMLEAD EIAAAIPESD KTLDVQAFIS CDEVDDVFFD RPYYLAPSNQ
ATEEAFALLR EGMRAKKVAA LARAMLFRRM RSLLIRPSGA GLIASTLNFD YEVRSADEAF
ADVRDVKIEG EMLDLAEHII KTKTGKFDVS KFDDRYEAAV AALVKAKLEG RKIEPPKPVA
ATNVTSLLDA LRESAKGTAR ATAKSTSKAS EAKTRAPRKK AS