| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1705 |
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| Symbol | |
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| ID | 7093165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1852643 |
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| End bp | 1853665 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643465029 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_002362014 |
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| Protein GI | 217977867 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.402619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAA TGAACGTCGT CAGAACTCTC TTTGCGCTCG GGCTCATGAT CGGGTGCGCG
CAGGGGGCGC AGGCGGGCCT GCTCGATCAG GTGCAAAAGC GCGGCTATGT GATCTGCGGC
TCCAATCCTG GCGTTCCGGG GTTCGGCCTG CCCGACGATA AGGGCGGCTG GACGGGGTTC
GACGTCGATT TCTGCCGCGC GGTCGCCGCC GCCATCTTCA ATGACCCGAC CAAGGTCAAA
TTCATCGCGC TGAGCGCCAA GGACCGCTTC ACCGCCCTGC AGTCCGGCGA AGTCGATCTG
CTCTCGCGCA ACACGACCTG GACGCTGTCG CGCGAGACGG GACAGGGGTT CCTCTTCGCC
GGGATCACCT ATTACGACGG GCAGGGCTTT CTGGTGCGCA AAAAGCTCAA TCTTTCGTCC
GCGCTGGAAT TGTCCGGGGC CTCGATCTGC GTCCAGCAGG GCACCACGAC GGAGCTGAAC
CTCGCCGACT TCTTCCGCGG CAACAATATG AAATATGAGC CGGTCAATTT CGCCAACGCC
GAGGAGGCGG TGCGGGCCTT TGAGGGCGGC CGCTGCGACG CCTACACCAC TGACGCCTCC
GGCCTCTATG TCGAGCGCCA GCGTCTCGCG GACCCTGAAG ACAGCGTGGT GCTGCCGGAA
ATTATCTCGA AGGAGCCGCT CGGCCCCGCC GTCCGTCAGG GCGACGATGG ATGGTTCAAC
GTCGTCAAAT GGACCTTGTT CGCGCTCGTC AATGCGGAAG AGCTCGGCGT CACCTCCAAG
AACGTCGACG AAAAGGCCAA ATCCGATCGG CCGGAAGTCA GGCGTCTGCT CGGCTTTGAA
GGCAATTTCG GCGAACCGCT CGGGCTTGAC GCCGATTGGG CCTACCGGAT CGTCAAGCAT
GTCGGCAATT ACGGCGAAAT ATTCGATCGC AATCTCGGCG ACTCCTCGCC TTTGAAAATC
AAGCGGGGGA TCAATGCGCT CTGGACCAAG GGCGGGCTGC AATACGCCCC GCCGATCCGA
TAG
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| Protein sequence | MFKMNVVRTL FALGLMIGCA QGAQAGLLDQ VQKRGYVICG SNPGVPGFGL PDDKGGWTGF
DVDFCRAVAA AIFNDPTKVK FIALSAKDRF TALQSGEVDL LSRNTTWTLS RETGQGFLFA
GITYYDGQGF LVRKKLNLSS ALELSGASIC VQQGTTTELN LADFFRGNNM KYEPVNFANA
EEAVRAFEGG RCDAYTTDAS GLYVERQRLA DPEDSVVLPE IISKEPLGPA VRQGDDGWFN
VVKWTLFALV NAEELGVTSK NVDEKAKSDR PEVRRLLGFE GNFGEPLGLD ADWAYRIVKH
VGNYGEIFDR NLGDSSPLKI KRGINALWTK GGLQYAPPIR
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