Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msil_1690 |
Symbol | |
ID | 7093150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylocella silvestris BL2 |
Kingdom | Bacteria |
Replicon accession | NC_011666 |
Strand | - |
Start bp | 1832775 |
End bp | 1834211 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643465014 |
Product | type I secretion outer membrane protein, TolC family |
Protein accession | YP_002361999 |
Protein GI | 217977852 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.522729 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACCG AAAGTTTGGT TGACGCCTCG CATCGAGCCG CTTCGTCCTG CATCGACCTC AACCGAGGCA AGTTCGCAAA AGCGCTCGCC ATAGCCCTTT TCGGCTCGAT TGCCGCTGCC AATCCGGCCG GGGCCGAAAC CATGTCGAGC GCGCTGGTTC GCGCTTATAT CGGCAATCCG GATATGAACC AGCAGCGCGC GGGCGTTCGC GCGCAGGACG AGAATATCCC CCGGGCGACC TCGGGCTGGC GTCCGCAGGC CAGCGCGACC GGGCAGGTTG GCTATAATTA TCAGGACTTT CGCCAGCTCG GCACGCGCCT CAATGGCAGC ACCCTGCCAA CCTCCATCGG TCTCTCGGTC ACGCAAAATG TCTTTAACGG CAACCGCACG CTGAATTCGG TGCGGCAGGC CGAGTCGGGC GTCTTCGGCG CCCGCGAGGA TCTGCGCAAC ACCGAGCAGA ACGTCCTGCA GAACGGCGCG ACCGCCTATA TGAATGTGCT GCGCGACACC GCCGTGCTTG AGCTTCGCCG CAACAATATC ACCGTTCTCG AAGAGCAGCT GCGCCAGACG CGCGACCGCT TCAATGTCGG CGAAGTGACC CGCACCGACG TGGCGCAGGC GGAATCGAGC CTGGCGAATT CGCGCTCGGA ATATTTCGTC GCGCAAGCCA ATCTTCAAAA CAGCATCGCC AATTTCCGCC AGATCATCGG CGTCGAGCCG ACCCGTCTCG AGCCGGCGCG CACCATCGAG GCCCTGCTGC CGAAGAACAT GAATAGCGCG GTGGCTCTGG CGCTCGAGGA GCATCCGGCG ATTCAGGCGG TGCTACATGC GGTCGATCAG GCGGAATTGC AGGTCAAGCT GGTCGAGGGC GAACTGGCCC CGAGCGTCAA TATCGTCGGC AGCGTGCAGC GCGCGACCGA CTATCAGGGC ATTCGCAACG CGAGCCTCGT CAACGGACAG GTGGTCGGAC AGATCTCGGT GCCGATCTAT ATGGGCGGCG AAGTCTACGC CCGCGTCCGC CAGGCGAAGG AGACGCTGGC GCAAACGCGG CTGCAAGCCG ATCTGCAGCG CGACTCCGTC CGCGCCACCG TGGTCTCGGC CTATGGGCAG CTCGACTCGT CGAAAGCGGT CATCCAGTCG GCCAAGGCCG CGGTGAAGGC GGCGGAAATC GCCCTCGACG GCATCCGCGA GGAGGCCAAG GTCGGCCAGC GCACGACCTT CGACGTGTTG TTCGCGCAGC AGACGCTGCT GAACACGCGC GTCAGCCTCG TCACCGCCCA GCGCGACCGC GTCGTCGCCT CCTACAATGT GATGGCGGCG ATCGGCAAGC TCTCGGCGGC CAACCTCAGC CTGAACGTCG CCGAATATGA TCCGACCGTC CATTTCGAGC AGGTCAAGGA CAAGTGGATC GGCCTGCGCA CGCCGGACGG GCGCTAA
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Protein sequence | MGTESLVDAS HRAASSCIDL NRGKFAKALA IALFGSIAAA NPAGAETMSS ALVRAYIGNP DMNQQRAGVR AQDENIPRAT SGWRPQASAT GQVGYNYQDF RQLGTRLNGS TLPTSIGLSV TQNVFNGNRT LNSVRQAESG VFGAREDLRN TEQNVLQNGA TAYMNVLRDT AVLELRRNNI TVLEEQLRQT RDRFNVGEVT RTDVAQAESS LANSRSEYFV AQANLQNSIA NFRQIIGVEP TRLEPARTIE ALLPKNMNSA VALALEEHPA IQAVLHAVDQ AELQVKLVEG ELAPSVNIVG SVQRATDYQG IRNASLVNGQ VVGQISVPIY MGGEVYARVR QAKETLAQTR LQADLQRDSV RATVVSAYGQ LDSSKAVIQS AKAAVKAAEI ALDGIREEAK VGQRTTFDVL FAQQTLLNTR VSLVTAQRDR VVASYNVMAA IGKLSAANLS LNVAEYDPTV HFEQVKDKWI GLRTPDGR
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