| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1587 |
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| Symbol | |
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| ID | 7090944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | - |
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| Start bp | 1713639 |
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| End bp | 1715444 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643464913 |
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| Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
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| Protein accession | YP_002361898 |
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| Protein GI | 217977751 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.174692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAAA TCCTATTGAT GTCCTGTGTC GCCGCATCTG CGCTCATGGC GAACGGGGCG
TTCGCAAACG AAGAGCTGAT CACTCTTCAA AAGAACGCCA AGAACTGGGC TCTGCCCACC
GGTGACTATT CTAACCACCG CTTCTCGGAA CTCAATCAAA TCACCAACAA GAACGTTAAG
GATCTCGTTC CGGTTTGGAC GTTCTCGACA GGCGTGCTGC GCGGCCACGA AGGCAATCCG
CTCGTGATCG GCGACGTGAT GTATTTCTCG ACGCCCTTCC CCAACATCGT CTACGCTCTC
GATCTCAACA ATGACGGCAA GATCCTTTGG AAATATGAGC CGAAGCAGGA TCCGAGCGTC
ATTCCGGTGA TGTGCTGCGA TACCGTAACG CGCGGCGTCG CTTACGGCGA CGGCAAGATT
ATTCTCGGCC AGGCCGACAC CACGCTCGTT GCTCTCGACG CCAAGACCGG CCAGCCGGTT
TGGTCCGTGA AGAACGGCGA TCCGGCGAAG GGCGAAACCA ACACGTCCGC CCCGCAGGTC
ATCAAAGACA ATGTGATCAT CGGCATCTCC GGCGGCGAGT TCGGCGTCCG CGGTTCGGTG
ACGGCTTACG ATCTCAAGAC TGGCAAAAAG GTGTGGCGCG GCTATTCGAT GGGCCCGGAC
TCCGATACGC TGATCGATCC CGAGAAGACC ACCGCTCTCG GCAAGCCGGT CGGCGCGAAC
TCCGGCACCA ACACCTGGGA AGGCGATCAG TGGAAGATCG GCGGCGGAAC GACGTGGGGC
TGGATCTCCT ATGATCCCGA ACTGAACCTC GTCTACTACG GCTCCGGCAA TCCCTCGACC
TGGAACCCGG TGCAGCGTCC CGGCGACAAC CGTTGGTCGA TGTCGGTCTG GGCGCGTGAC
GCGGACAGCG GCAAGGTCAA GTGGATCTAC CAGATGACCC CCCACGACGA GTGGGATTAT
GACGGCATCA ATGAAATGGT GCTGACCGAG CAGAAGATCG GCGGCAAGGA GCGCAAGCTT
CTGACCCACT TCGATCGTAA CGGCTTCGGC TATACGCTCG ACCGCGTCAC CGGCGAATTG
CTCGTCGCCG AGAAATACGA TCCGGCCGTC AACTGGGCGA CCAAGGTCGA TATGGACAAG
TCGTCGAAGA GCTACGGCCG TCCGCTCGTC GTGCCGCAGT TTTCGACCGC TCACGGCGGC
GAAGACGTGA ACACGAAGGG CATCTGCCCG GCCGCTCTCG GCTCCAAGGA CGAGCAGCCT
TCGGCTTACT CGCCCCTCAC CGAACTGCAC TATGTTCCGA CCAATCACGT CTGCATGGAC
TATGAGCCCT TCAGAGTGAG CTACACCGCT GGCCAGCCCT ACGTTGGCGC GACGCTGTCC
ATGTATCCGC CGAAGGGCGA ATCCAACATG GGCAACTTCA TCGCTTGGGA CGCCAAGGTC
GGCAAGATCG TATGGTCGAA CAAGGAGCAG TTCTCGGTGT GGTCGGGCGC GCTCGCGACC
GCCGGCAACG TCGTGTTCTA CGGCACGCTC GAAGGCTACC TCAAGGCTGT CGACGCCAAG
ACGGGCGAAG AACTCTACAA GTTCAAAACG CCGTCGGGCA TCATCGGCAA CGTGATGACC
TATGAGCACA AGGGCAAGCA GTTCGTCGCC ATCCTGTCCG GCGTCGGCGG CTGGGCCGGC
ATCGGCCTCG CGGCCGGCTT GACCGATCCG AACGCCGGCC TCGGCGCCGT CGGTGGTTAC
GCCGCCCTGT CGAACTACAC AGCGCTCGGC GGTCAGCTGA CCGTTTTCGC TCTGCACGGT
AAGTAA
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| Protein sequence | MRKILLMSCV AASALMANGA FANEELITLQ KNAKNWALPT GDYSNHRFSE LNQITNKNVK
DLVPVWTFST GVLRGHEGNP LVIGDVMYFS TPFPNIVYAL DLNNDGKILW KYEPKQDPSV
IPVMCCDTVT RGVAYGDGKI ILGQADTTLV ALDAKTGQPV WSVKNGDPAK GETNTSAPQV
IKDNVIIGIS GGEFGVRGSV TAYDLKTGKK VWRGYSMGPD SDTLIDPEKT TALGKPVGAN
SGTNTWEGDQ WKIGGGTTWG WISYDPELNL VYYGSGNPST WNPVQRPGDN RWSMSVWARD
ADSGKVKWIY QMTPHDEWDY DGINEMVLTE QKIGGKERKL LTHFDRNGFG YTLDRVTGEL
LVAEKYDPAV NWATKVDMDK SSKSYGRPLV VPQFSTAHGG EDVNTKGICP AALGSKDEQP
SAYSPLTELH YVPTNHVCMD YEPFRVSYTA GQPYVGATLS MYPPKGESNM GNFIAWDAKV
GKIVWSNKEQ FSVWSGALAT AGNVVFYGTL EGYLKAVDAK TGEELYKFKT PSGIIGNVMT
YEHKGKQFVA ILSGVGGWAG IGLAAGLTDP NAGLGAVGGY AALSNYTALG GQLTVFALHG
K
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