Gene Msil_1580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsil_1580 
Symbol 
ID7090937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylocella silvestris BL2 
KingdomBacteria 
Replicon accessionNC_011666 
Strand- 
Start bp1709620 
End bp1710135 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content66% 
IMG OID643464906 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_002361891 
Protein GI217977744 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.349241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTATCGA ACGGGCCTGA GCCGGTCGAA GCGCCGGTCG CGATTGGCCT CGGCCTTGGC 
AGCAATATTG GCGACAAGCC CGCCAATCTT GCGGCGGGCC TTGCGCATCT TGAGGCGCGC 
GGCGCCGTCA AGATCGACGC TGTTTCCTCG ATCTACCGCA CTGCGCCCTG GGGCTATCTC 
GACCAGGAGG ATTTCGCCAA CGCTTGCGCC CTGGCGACGA CGACGCTGTC GCCCCGCGCG 
CTTTTGGCCG AGGTCAAAGC CGTCGAGGCG GAAATGGGCC GGTTGCAGGG CCTGCGCTGG 
GGCCCGCGCC TGATCGATAT CGACATTCTG TTTTATGGCG ACCATGAAAT CGAATGGGCG 
GAGCTCGTGC TGCCGCATAA GGAGCTGTTC CGGCGCGCCT TCGTGCTGGA GCCCTTGGCG 
GAGATCGCGC CGCAGCTGAT GCTTGGCGGT CGCAGCGTGC GGGAGGCCGC GGCCGAGGCC 
GGCGGCAAGG GCGTCGAACG CTGGTTCAAA TCCTGA
 
Protein sequence
MLSNGPEPVE APVAIGLGLG SNIGDKPANL AAGLAHLEAR GAVKIDAVSS IYRTAPWGYL 
DQEDFANACA LATTTLSPRA LLAEVKAVEA EMGRLQGLRW GPRLIDIDIL FYGDHEIEWA 
ELVLPHKELF RRAFVLEPLA EIAPQLMLGG RSVREAAAEA GGKGVERWFK S