| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_1476 |
|---|
| Symbol | |
|---|
| ID | 7091819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylocella silvestris BL2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011666 |
|---|
| Strand | + |
|---|
| Start bp | 1594630 |
|---|
| End bp | 1596144 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643464810 |
|---|
| Product | 2-hydroxymuconic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_002361796 |
|---|
| Protein GI | 217977649 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03216] 2-hydroxymuconic semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTTC AGGCATTGCA GGGGCTGGCG CAAATTCGCG TCGATACAGC GCGCCGCGAC
GCGGCGCATT TCATCAATGG CGAGTTCACG CAGGGATTGA CCAGCAAGGG CTGGTGGGAG
AACCGCTCGC CGCTCGACAA CAGCGTGATA GGCCGCGTGC CGGAGGGCGG CCAGGCGGAG
GTTGACGCGG CGGTGCACGC CGCCCGTGCG GCGCTCGACG GCACCTGGGG CAAGATGACG
GTGGCCCAGC GGACCGATCT GCTCGCCGCA GTTGCCAACG AAATCGACGC CCGCTTTGAT
GAATTCCTCG CCGCCGAATG TCTCGATACC GGCAAGCCCT ATAGCCTCGC CTCGCATATC
GATATTCCGC GCGGCGCCGC CAATTTCAAG ATGTTCGCCG ATACGGTGAA GAACGTCTCG
ACCGAAACAT TCATCCTCGA CACGCCGGAC GGCAAGAGCG CCGTCAATTA CGGCCTCCGC
CGACCCAAGG GCCTGATCGC GGTAATTTCG CCGTGGAACC TCCCGCTGCT GCTCATGACC
TGGAAAGTCG GCCCGGCGCT CGCCTGCGGC AACACAGTTG TGGTGAAGCC GTCGGAAGAA
ACGCCGTTGA CTGCGACGCT GCTCGGCGAA GTGATGAACA AGGTCGGCGT GCCGAAGGGC
GTCTATAACG TCGTCCACGG CCTCGGCCCG AATTCCGCCG GCGAGTTCCT AACCCAGCAT
CCGCTGGTCA ACGGCATCAC TTTCACCGGC GAGACCCGGA CCGGCGAGGC GATCATGCGC
CAGGCGGCGC TCGGCGTGCG GCAGGTGTCG TTCGAATTGG GCGGCAAGAA TCCGGCGATT
GTGTTCGCGG ATTGCGATCT GGACAAGGCG ATCGAGGGCA CGATGCGCTC GGCTTTCGCT
AACTGCGGCC AAGTTTGTCT GGGCACCGAG CGCGTCTATG TCGAGCGCCC GATCTTCGAC
TCCTTCGTGG CCCGCATGAA GGGGGACGCC GAGGCCTTGA GGCTCGGACG GCCGGAAGAC
GGCGCGACTA ATCTTGGCCC ACTGATCAGT CAGGAACATC GCAGCAAGGT GCTGTCCTAT
TACAAGTTGG CCCTGGAGGA AGGCGCGACC CTTGTCACGG GCGGTGGCGT TCCCGACATG
CCCGGCGAGC TTGCGCTTGG CGCCTGGGTT CAGCCGACCA TCTGGACCGG ACTCAAGGAT
GACGCCCGCG CCGTCAACGA GGAGATTTTC GGGCCGTGCT GCCATATCCG CCCGTTTGAC
ACGGAAGAAG AGGCGGTCAG GCTAGCCAAT TCCACGCCCT ACGGACTCGC CGCGGCGGTG
TGGACGGAGA ACGTCTCCCG CGCCCATCGC GTCGCGTCGA AAATGGATGT CGGCATCTGC
TGGGTAAACT CCTGGTTTCT GCGCGACCTG CGCACGGCCT TCGGCGGCGC CAAGCAGTCC
GGCATCGGCC GGGAGGGCGG CCTTCACTCG CTGGAGTTCT ATACCGAACT CTCCAACGTC
TGCATCAAGC TTTGA
|
|---|
| Protein sequence | MSVQALQGLA QIRVDTARRD AAHFINGEFT QGLTSKGWWE NRSPLDNSVI GRVPEGGQAE
VDAAVHAARA ALDGTWGKMT VAQRTDLLAA VANEIDARFD EFLAAECLDT GKPYSLASHI
DIPRGAANFK MFADTVKNVS TETFILDTPD GKSAVNYGLR RPKGLIAVIS PWNLPLLLMT
WKVGPALACG NTVVVKPSEE TPLTATLLGE VMNKVGVPKG VYNVVHGLGP NSAGEFLTQH
PLVNGITFTG ETRTGEAIMR QAALGVRQVS FELGGKNPAI VFADCDLDKA IEGTMRSAFA
NCGQVCLGTE RVYVERPIFD SFVARMKGDA EALRLGRPED GATNLGPLIS QEHRSKVLSY
YKLALEEGAT LVTGGGVPDM PGELALGAWV QPTIWTGLKD DARAVNEEIF GPCCHIRPFD
TEEEAVRLAN STPYGLAAAV WTENVSRAHR VASKMDVGIC WVNSWFLRDL RTAFGGAKQS
GIGREGGLHS LEFYTELSNV CIKL
|
|---|
| |